| Annotation |
|---|
| Description | jgi|Araly1|471752|fgenesh2_kg.1__1706__AT1G15510.1 |
| Sequence |
ATGGCGTCTT CTGCTCAAAG TCCTCACTTT TATCTCAATC CAGGCAAGTC CAACTCTTTC CAGAGCAAAG CTCATAAACA CAGAAACGTT AATTTCTATT GGAATTTTGG ATTTCGGAAA CTTTTCTTGA GAAAATCTCG AGGACTATCT GTTCTTAGCT CGAGTTCTAG TAGTACCCAC TTTTCGAATT CTCAATTACA TGGGCTTTGC GCGAATGGGA AGCTGGAGGA AGCTATGAAG CTTCTCAATT CTATGCAGGA GTTGCGGGTT GCGGTAGACG AAGATGTGTT TGTGGCTTTG GTTAGGCTGT GCGAGTGGAA GAGAGCACAT GAGGAAGGTT CTAAGGTTTA TTCTATTGCT CTCAGTTCTA TGAGCAGTCT GGGTGTTGAA CTCGGTAACG CGTTTCTCGC TATGTTTGTG AGGTTTGGTA ATTTGGTTGA TGCCTGGTAT GTTTTCGGTA AAATGTCTGA GAGGAACTTG TTTTCTTGGA ATGTGTTGGT TGGTGGCTAC GCAAAGCAAG GCTATTTCGA CGAGGCGATG TGTTTGTATC ATAGAATGTT GTGGGTTGGT GGTGTGAAGC CTGATGTCTA TACGTTCCCC TGTGTATTGA GAACCTGTGG AGGTATACCT GATCTAGCTC GAGGAAGAGA GGTTCATGTT CATGTGGTTC GATACGGATA TGAATTGGAT ATTGATGTTG TAAACGCTTT GATTACTATG TATGTGAAGT GTGGTAATGT CAAGAGCGCA AGGTTGCTTT TTGATAGAAT GCCCAGGAGA GATATAATCT CGTGGAACGC AATGATCTCG GGGTATTTTG AGAATGGGAT GTGTCATGAA GGATTGAAGT TATTCTTTGC AATGCGTGGG CTTTCTGTTG ATCCTGATTT GATGACCTTG ACAAGTGTTA TCTCTGCCTG TGAGCTTCTT GGAGATAGAA GGTTAGGAAG GGATATTCAT GCTTATGTGA TAACCACGGG TTTTGCTGTT GACATATCTG TCTGCAATTC GTTAACGCAG ATGTACTTAT ATGCTGGGTC ATGGCGTGAA GCTGAAAAAC TGTTCAGCAG AATGGATTGC AAAGACATTG TGTCATGGAC CACTATGATT TCAGGCTATG AGTATAATTT TCTGCCCGAG AAGGCCATAG ACACTTACAG AATGATGGAT CAAGATTCTG TGAAGCCAGA CGAGATAACA GTAGCTGCTG TTCTATCTGC TTGTGCTACT CTAGGTGATC TTGACACAGG TGTTGAGCTC CATAAGCTTG CGATTAAGGC AAGGCTCATA TCCTATGTGA TTGTTGCAAA CAATCTCATT AATATGTACT CAAAGTGCAA ATGCATTGAT AAGGCCTTGG ACATCTTCCA TAACATCCCC CGCAAGAATG TAATATCTTG GACATCGATT ATTGCAGGGC TTCGACTCAA CAACCGGTGT TTTGAGGCCT TGATATTCTT CCGGCAGATG AAAATGACGT TGCAGCCAAA TGCAATAACC TTAACAGCTG CATTAGCAGC TTGTGCTAGA ATCGGGGCTC TGATGTGTGG GAAAGAGATT CATGCCCATG TACTGAGAAC AGGAGTGGGA CTTGATGATT TTCTTCCAAA TGCACTCTTA GACATGTATG TACGGTGCGG GAGAATGAAC ATTGCATGGA ATCAGTTCAA CTCACAGAAA AAAGATGTCT CATCATGGAA CATTCTTCTT ACTGGATATT CAGAGCGGGG TCAAGGGTCG GTGGTGGTAG AGTTATTTGA TAGAATGGTT AAGTCCAGAG TAAGGCCAGA TGAGATTACA TTCATCTCAT TGTTATGTGG TTGTAGCAAA TCCCAAATGG TGAGACAAGG TTTGATGTAC TTCAGCAAAA TGGAAGAGTA TGGTGTTACC CCAAACTTGA AGCACTATGC GTGCGTGGTT GATTTGCTTG GCCGTGCAGG CGAATTACAA GAAGCACACA ATTTTATTCA GAAAATGCCA GTAACACCAG ATCCAGCCGT ATGGGGAGCT ATGCTTAATG CATGCAGGAT TCACCACAAC ATTGATCTTG GTGAGCTATC AGCGCAGCGT ATATTTGAGC TGGACAAAGG AAGTGTTGGC TATTACATTC TGTTATGTAA TCTGTATGCT GATTGTGGAA AATGGAGAGA AGTTGCAAAA GTGAGGAGAA TGATGAAAGA AAACGGGCTA ACAGTTGATG CAGGATGCAG TTGGGTTGAG GTAAAGGGTA AAGTTCATGC CTTTCTTAGC GATGACAAGT ACCATCCTCA AACAAAAGAG ATCAACACTG TTTTAGAGGG GTTCTATGAG AAAATGAGTG AAGTTGGGCT AACTACAAGT TCAGAATCAA GTTCTATGGA TGAGACAGAG ATTTCGAGAG ATGAGATATT CTGTGGACAT AGCGAGAGAA AGGCCATTGC ATTCGGTCTG ATCAACACGG TCCCAGGAAT GCCTATTTGG GTAACAAAGA ATCTAAATAT GTGTGAAAGT TGCCATGATA CAGTAAAGTT CATCTCCAAA ACAGTAAGAA GAGAAATCTC GGTTAGAGAT TCTGAGCATT TCCACAACTT TAAAGATGGA GAATGTTCAT GTGGAGGTTA G |
| Length | 2601 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6250944.. 6253556 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G15510.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis. |
| Alias | [ATECB2][ECB2][VAC1][ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2][EARLY CHLOROPLAST BIOGENESIS2][VANILLA CREAM 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg353700 | DNA topoisomerase, type IA, core |
| 3.4641 |
Ahg480424 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 3.87298 |
Ahg910344 | NOL1/NOP2/sun family protein |
| 7.34847 |
Ahg317013 | Ribosome recycling factor |
| 10.583 |
Ahg890991 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
| 11.6619 |
Ahg313639 | nuclear RNA polymerase A2 |
| 13.2288 |
Ahg481268 | DNA/RNA polymerases superfamily protein |
| 14.4222 |
Ahg494089 | Nucleic acid-binding, OB-fold-like protein |
| 14.4914 |
Ahg489519 | lon protease 1 |
| 15.2971 |
Ahg478011 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|