Detail


ID : Ahg484560

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484560|fgenesh2_kg.5__552__AT3G27720.1
Sequence
ATGGATGACG AATATATGAG CTTCGAGGAG GAGGAAGACG ATTATTGTTG CTCCTCCGAT GATCATGATG ATGAGGAGTA TAACAACGCG GAAGAATCCG TTTTGCAACA ACCAAGAGAA CCTACGAGCC AGAAGGAAGT TATGGTTAGG GTTATGGAAT TGTTATCGGT TAAGGAGAAC CAAGCGAGGA CTCTTCTTAT TCATTATCAA TGGAACGTTG ATAAGTTGTT TTCTGTGTAT ATTGATCAAG GCAAAGATCT TTTGTTTTCT TGTGCTGGTC TTACTGTTTT TGACCCTTCC TTAGTTAAGT CGAAGAGGAA GAAGAAGAAG AAGAAGGAGA AGACGAGGAA GAGGAAGAAG AAGGAGAAGA AGGGGGAGGA GGAGACGAGG AAGAGGAAGA AGGCAAAAAA AACGATGAAG TGTGATATCT GCATGGAAGA GGATTTATCA AAATATGCCA CGACAAGAAT AGAGCAACTA GTTAGCCCGG AGTTAGCTGA GAAGTTTGAT CGTTTCCTCG TTGAGTCATA CGTAGAAGAT AACAATATGG TGAAGTGGTG TCCAAGCACA CCACATTGCG GGAATGCGAT ACGAAAAATC AAAGATGATA GCGATGACGA GGTGGAATGT TCATGTGGAC TTCAGTTCTG TTTCAGTTGT CTGAGTGAGT CTCACTCTCC TTGCTCTTGT TTGATGTGGA AGCTATGGAA AAAGAAGTGT GTAGACGAGT CTGAGACGGT TAATTGGATG ACCGTTAACA CGAAGCTGTG TCCCAAATGT AGCAAACCTA TTCAAAAGAG AGACGGTTGC AATCACATGA CTTGTAAGTG TGGTCAGTTT TTTTGCTGGC TGTGTGGTCA AGCTACTGGA GCAGAACATA GTTTTAGGAG TATCGCTGGT CATAGTTGTG GTCGGTACAA AGATGAAAAA GTGAGGCAAA TGGAGAGAGC CAAAAGGGAT TTAGACAGGT ACACACATTA CCATTACCGA TACAAAGTGC ACACCGATTC ATTAAAGCTA GAGGATAAAC TTAGGAAGAG TATCCTGAAG AAGGCACTGT TAAATTCTGA AACCAAGGAT CAAGAAGAGT TTAAAGAATA CAGTTGGGTT ACAGATGCAG TCAACCGGTT ATTCAGATCA CGACGGATTC TTTCGTATTC GTATCCTTTC GCGTTCTACA TGTTTGGCGA AGAGTTGTTC AAAGATGAGA TGAGCGATGA AGAGAGAGAT ATAAAGAAGA ATCTGTTTGA AGATCAGCAG CAACAACTTG AAGGTAATAT TGAGAAACTT TCCAAGATTT TAGAAGAGCC TTTTGATGAG TATGGTCATG AGGAAGTAAT AATTATGAAG AGTCAACTAA TCAAGATGTG TGCTATGGTT GATACACTAT GCAAGAAAAT GTATGAGTGC ATTGAAAATG ACTTATTAGG TCCACTCGAA TCTGGAATCC ACAACATTGC ACCTTACAGA TCAATGGGAA TAGAACAAGC TGCTAAATTT TCTGCTTCTT CGGCTTGTAG TTCAAGCGGA TCTTCGTCGA ATTAA
Length1545
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3780351.. 3782039
Download Sequence
A.thaliana
AGI-codeAT3G27720.1
DescriptionIBR domain containing protein
TAIR curator summary
Alias[ARI4][ATARI4][ARIADNE 4][ARABIDOPSIS ARIADNE 4]
Gene coexpression
MR
MR Locus Description
4 Ahg356864
5.47723 Virus0598
9.79796 Ahg905532
12.1655 Ahg906742 Leucine-rich repeat (LRR) family protein
42 Ahg917508 cyclic nucleotide gated channel 5
44.1588 Ahg949588
66.9925 Ahg912127
74.3976 Ahg912062 Protein of unknown function (DUF626)
76.6551 Ahg946574 FK506 BINDING PROTEIN 53
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression