Detail



ID : Ahg484582

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484582|fgenesh2_kg.5__574__AT3G27930.1
Sequence
ATATTCAAAC GTGAAGCAAA AGCAGAAGCG ACACTATCGC CGCTCTCAGT AACTATTGAT TCATCGAAGA AGCTCTCTCG TTGTCGCAGA ATCTCTTCTT CTCCGTTCTA GAGTAATGGG GAATGCTCTG GTCAAAAAAG AACCACCGCC TCCTGTGGTC CTAGTTCCTC CGCTCTTTGA TTTCCCTCCT CTCTCCGCCC GTACTAGGAT GTTGGAATCA TCATATAATT TGTTGTTTGG GAAGCTTGCA TTGAAATGTC TATTTGAGGA TTACTTTGAA GAAGCAAATA ATTTCTCGGC GAAGTTTTTG TTGAAGCCTA TTGATGATCC TCATGTGGAT TTGGTTGCAT CTGTATCGGG TGCAGTAGAT GGTAGAGCGG ATGGAGATTT TGTTGGAAAA GCGGAGTTTC GCTGGCAAAG TGATGTTGAT GATCCTCATA CTTTTGTGGA CCTCTCTGTG TCAACATCGA ATCCGGTTCT TCTAATGAGG TCTTCTGCTT ACTACCCTAA GTATGGGATC GGGGCATTTG CAGTCTACCC TTTGATTTCA AAAAAGACTG GAAACTTATC TGAAGAATAT AGAATCATGG GGTTGAGATA TGGCTCAACG AATTTGTCTC TCGGAGCTAC TGTCACTCCT TTTACTGCGG ATAACGAATC GCCAAAGCAG GCATGGCTTG TAAGCAAGAT GGGAAGGTTT ACAGTAGGAG TGCAGTATGA GCCGCTACAT GGAAGCGAAG ATTTGGCCAA GTACACAGAC CTAAGAAACT GGAGTTGTGC TGCTGGCTAT GGAGTAGGGT CACAAAGCCC CCTGAGTCCT TCGTTTAACA TTGGCATTGA ACTAGCAAGA AGCTCTCAGT TTATCGCTAC GTTCTACCAA CACATCGTGG TACAAAGACG GGTGAAAAAT CCTTTTGAAG AAAACCAAGT AGTTGGAATC ACAAACTACA TTGATTTAGG TTTTGAGTTA CAATCGAGGG TTGATGATTC CACGACGCCA CACAATGCCC CAGATTCTTT ATTGCAGATG GCTGCGTCTT GGCAGGCCAA TAAGAACTTC TTGCTAAAGG GTAAAGTCGG AGCTCATAGC TCAACATTGT CATTAGCATT CAAGTCGTGG TGGAAACCGT CTTTCGCATT CAATATTTCA GCAACAACTA ATCATCGCAC TGGAAATGTC GAATGTGGGT TTGGTCTCCG TGTTGATAAC ATAAGAGAAG CCAGTTACCA AAGAGCTGAT CCAAACTTTG TAATGCTAAC ACCGAACAAA GAACATTTAG CTGAAGGGAT TGTGTGGAAA ATGGGGAAGA GGCCAATGTA TCAAGCCGAT GTGGACGCAG AGAATTTCAG TGAACTGCCA AAAGAACTTA GACCGTCCCA GAAGATTCTC TAAACTAAAC CTTTAATTTT TTTGCACTTT TATCTAGTAG ATTTAGATCT CTACCAAGTC AAGTTTTTAA TAAGTTCGAC GAAAGAAGAT ATATTTAGTA ATAACCATTT TTACTCATAT GGAGCACAAG TGTTTTGTGT TCAAATTAGG AGCGAATTAT CTGGTTT 
Length1557
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3945309.. 3948202
Download Sequence
A.thaliana
AGI-codeAT3G27930.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.4222 Ahg477535 RING/FYVE/PHD zinc finger superfamily protein
22.4499 Ahg486690 RNA-binding (RRM/RBD/RNP motifs) family protein
32.187 Ahg491819 protein kinase family protein / WD-40 repeat family protein
47.3286 Ahg929022 histone acetyltransferase of the CBP family 5
47.5395 Ahg479443 fucosyltransferase 11
52.9339 Ahg939245 SET domain protein 14
55.5878 Ahg496680 CYS, MET, PRO, and GLY protein 2
62.9603 Ahg488545 binding partner of acd11 1
64.8845 Ahg487414 ARM repeat superfamily protein
70.9789 Ahg493365 Protein of unknown function (DUF604)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression