Detail



ID : Ahg484935

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484935|fgenesh2_kg.5__927__AT3G45450.1
Sequence
ATGTTTGAGC GTTTTACCGA AAGAGCAATT AAGGTCATTA TGCTGGCTAA AGAGGAATCT CGGAGGCTTG GTCATAACTT TGTTGGGACT GAGCAGATAC TGCTAGGTCT AATTGGGGAA GGGACTGGGA TCGCTGCAAA GGTTCTTAAA TCCATGGGGA TCAATCTTAA AGATTCACGT GTGGAAGTGG AAAAGATAAT TGGAAGAGGC AGTGGATTTT GTGCACTGGA GATTCCTTTA ACTCCTCGAA CAAAGCGTGT TCTGGATTTG TCACTAGAGG AAGCTCGACA ACTTGGGGAG GGTATTGCAG TTCGTGTCTT GGAGATATTG GGTGCAGGTC CTAGTAATAT CCGGACACTG GTAAATGCAC CTATTCTTGT TAATGTTATA CGTATGGTCG GGGGAAACAA TGAAGTCACA TCAAGCGTTG GTGGAGGAAA CATCGGAAAC AGAATGGCAA CACTAGAAGA GTATGGGACT AACTTAACTA AATTAGCAGA GGAGGGTAAA CTTGATCCGG TTGTTGGAAG GCAGCCACAG ATCGAACGAG TGGTCCAGAT CTTGGCTCGA AGAACTAGGA ACAACCCGTG TCTTATTGGA GAACGTGGAG TTGGAAAGAG AGCAATAGCG GAAGGACTTG CACAGCGAAT CCCTAGTGGT GATGTTCCTG AAACAATCAA GGGGAAGACG GTTATAACCC TTGATAAGGG TCTTCTAGTG GCTGGAACAA AATACCGTGG AGAATCCGAG GAAAGACTGA AGAAGCTTAT GGAGGAAATC AGGCAAAGTG AAGACATAAT TCTGTTTATT GATGAAATGC ACATGCTCAT TGGTACAGGA GCCGCTGAAG GTGCGACCGA TGCTGCTAAC ATCTTAAAGC CAGCTGTAGC AAGAGGTGAA TTGCAGAACC GGAAACTCAA GTTGAAGCAC ATTGAGAAAG ATCCTGCATT GGAGAGACGG TTTCAGCCTG TGAAGGTACC TGAACCAACT GTAGAAGAAG CTATACAGAT CACTACTGCT TTAGCTAAAG GCAAAGAAGT GAGCAAAGCC GATAATGAAG CAGAGGAAGG AGGACCTACT GTTAAGGAAG CCGATAATCG GGCTGAGTAA 
Length1110
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11408435.. 11410113
Download Sequence
A.thaliana
AGI-codeAT3G48870.1
DescriptionClp ATPase
TAIR curator summaryEncodes a nuclear encoded protein with similarity to Clpa regulatory subunit of CLP protease complex. The protein is localized to the chloroplast stroma. May function redundantly with TIC complex in chloroplast protein import.
Alias[ATCLPC][ATHSP93-III][ClpC2][HSP93-III][ClpC2]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg911414
9.16515 Ahg932750 Polyketide cyclase/dehydrase and lipid transport superfamily protein
11.4891 Ahg896608
12.2474 Ahg942383 histidine kinase 5
12.3288 Ahg926181
12.3288 Ahg905519 CDPK-related kinase
19.4422 Ahg922587 histidine kinase 5
19.4936 Ahg951554
20.7846 Ahg948195
22.2486 Ahg894920 Putative membrane lipoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression