Detail


ID : Ahg485058

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485058|fgenesh2_kg.5__1050__AT3G46870.1
Sequence
GACGATTCAA AGTTCACACC TTTGAGAGAT GACAGCAATT CGCGTCTTCT CGCGAAAATT ACCAACTTTC GCTTCGATTT TCTTCCAAAA TCTCACTAGA AATCCGACAA TTCATCGAAT TTCATTCTCG AATCTAAAAC CCAAAACGTT ACTTCACCCA ATTCCGCCGA AACCCTTCAC TGTCTTTGTA TCTCGGTTCC ATGACGGGAG ACCAAGAGGT CCTCTTTGGA GAGGGAAGAA ACTGATCGGA AAAGAAGCCC TTTTCGTGAT TCTGGGTCTC AAGAGATTGA AAGACGACGA CGAGAAGCTG CAGAAGTTTA TAAAAACCCA TGTTTTCAGA TTGTTGAAAT TAGACATGTT AGCTGTTATC GGCGGGCTTG AACGACAAGA AGAGACTGCC TTAGCCATCA AGATGTTCGA GGTGATCCAG AAGCAAGAAT GGTACCAACC TGATGTGTTT ATGTACAAGG ACCTTATAGT ATCCTTAGCA AAGAGTAAAA GAATGGACGA AGCTATGGCT TTGTGGGAGA AAATGAAGAA AGAAAACCTC TTTCCTGATT CTCAGACTTA TACTGAGGTT ATCAGAGGAT TTCTTAGAGA CGGATGTCCC GCTGATGCCA TGAATGTGTA TGAAGACATG TTGAAATCCC CAGATCCGCC GGAAGAGTTG CCGTTTAGGG TTTTGTTGAA GGGGCTTCTG CCGCATCCGC TTCTTAGAAA CAAAGTGAAG AAGGATTTCG AAGAGTTGTT CCCTGAGAAA CATGCTTATG ATCCACCAGA AGAGATATTT GGTAGATGTT GAGGGGAAGT CTATGTTGAT CAAGATCCAG AGTGTGATAT TGAAGTACCA GTAGATCTGA GAAAGTGGCG AAACAAATTG TTACTTCACT TAGTTAGACG AACTCGGATT ATGTAGCGAC TTCTATTCCT TGTTATGATG CTTCATAATA TTAGGCAAAG ACCAAACTTT TGAATCCATC ATCTTTATGT AGTGACTTCT ATTCCTTGTT CTGATGCTTC ATAATATTAG TCAAAGACCG AACTTTGTTA ATCCATCATC TTTATAGTAA AAGATTCTAA GTTGACAACT
Length1090
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12230986.. 12232498
Download Sequence
A.thaliana
AGI-codeAT3G46870.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg472526 Tetratricopeptide repeat (TPR)-like superfamily protein
5.74456 Ahg483726
13.784 Ahg484639 Tetratricopeptide repeat (TPR)-like superfamily protein
16.7332 Ahg941195
17.8606 Ahg908764 carboxypeptidase D, putative
18.4391 Ahg486246 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
22.5832 Ahg476277 Pentatricopeptide repeat (PPR-like) superfamily protein
26.0384 Ahg311964 Tetratricopeptide repeat (TPR)-like superfamily protein
26.0768 Ahg944316
30.9839 Ahg922923 YbaK/aminoacyl-tRNA synthetase-associated domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression