Detail


ID : Ahg485118

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485118|fgenesh2_kg.5__1110__AT3G47540.1
Sequence
CACAAACAAC AAAACATGGC TTTCACAAAA ATTGTCTCAG TCATTTTCCT TTGCCTCTTA GGTCCTTGTA TAGGTGTTGG AACCACTAGC TCTGGTGGAT CAGTCAGTAG CATTGTGACA CAAGGTTTCT TTAACAACAT TATCAACCAA GCCGGTAATG GCTGCACGAG AAAAAGATTA TACACCCGCG ACTCTTTCAT TGACGCTGCT AATAGTTTTC CCAACTTTGC TAGTTCCGTT ACTAGACGTG AAATTGCTAC CATGTTTGCT CATGTCACTC ACGAGACCGG CCACTTCTGC TACATAGAAG AAACAAAGAA AAAGTCACGT GGCAGGTGCG ACGAGAACGT AGAGCAAAGA CCATGTCCAT CGCCGAGAAA AGGTCACTCC GGTCGTGGTC AGAGCCTCGG TCTCGACCTT CTAAGCCAGC CTGAGCTTGT GGGTAGCAAC CCAACTGTAG CTTTCACGAA GGGTTTGTCG TTTTGGATTA ATAGCGTAAG GCCGGTACTG AACCAAGGAT TTGGAGCCAC TATAAGAGCC ATCAATGGGA TGGAATGTAA CGGTGGGAAT TCAGGTGCTG TCAACGCAAG GATTGGGTAC TATAGAGACT ATTGTAGACA ACTTGGTGTG GATCCTGGTC CTAACCTTAG TTGCTAAAAA GTTCTTCAAA TGCAAACTCG CATACACGTG ACGTATCACG TGATAATGCG GAATAAGAAG TTAGATATAT AATAAAGTTA AATTTCATAC TCGCAAGTAC ATGGATTAAC GTTTTGTAAC TGTTA
Length785
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12635545.. 12636665
Download Sequence
A.thaliana
AGI-codeAT3G47540.2
DescriptionChitinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.8324 Ahg475850 Eukaryotic aspartyl protease family protein
19.3907 Ahg480417 RING/U-box superfamily protein
20.6398 Ahg331872 Protein of unknown function (DUF295)
25.923 Ahg934718 Uncharacterised protein family (UPF0497)
26.1916 Ahg476608 ADC synthase superfamily protein
29.2916 Ahg939077 Phosphoglycerate mutase family protein
36.5377 Ahg331636 Copper transport protein family
37.9473 Ahg496460 Protein of unknown function (DUF1645)
40.7431 Ahg478531 Protein of unknown function, DUF593
43.4741 Ahg484989 C2H2 and C2HC zinc fingers superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression