Detail



ID : Ahg485138

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485138|fgenesh2_kg.5__1130__AT3G47770.1
Sequence
ATGGCGAAAC CTGCTGCCGC CAGTTTCTTG ACGCAAGCCA ACGCCTTGTT CAAGAAAAAC TTAACTTATC AGAAACGGAA CATATGGAGC AACGTTAGGC TGATCTGTGC ATTCAAGCTG TGTTCGATTC ACTGGTTAAT AACTCTGTTG ATAATCAATG TGGTTGTCGA TGCATCGACG ACTCCGACAA AAATGGAGAT GGCAAATGCG AAAAAAAAAA GTTGTGGTTT ACAATATTCA TCACAAAACC AAGCTGTCTT CTGTGCCTTC CCTAACCCTC CACCATTGCT TCCTTTGTTA CATATTCCTC GTTCTTTTAA TCATACCCGT CGTGACTCGT GCAAACGAAC CGGATCTTGT CCTGGCACAA CATCAGAGAC AGACTACACC AACTATCGTG ATCCAGGGAT TTACTCAGAT CTTCCCATTT TCAATATCCA ACCTCAGTGC ACCCCAGCCA CTACATTGTC ATTCTCATTC CGACAACCAC CTCTCGAGTT TCATAAAGGT ATTTTATGCG TTCAAGGATT GAGTCTCTGG AGAAATAACT CCGTAGAGGT CAATGATGAG ATCTTTAAGG GCTATCGTAA AGAAAATCAT GCAGAGATCA TCAATGAGGT CGCTGCAGCA TACGATCTCT TGGACACGGA TAGGAACAAC TTCAATGTGA ACATCTGGTA TTACACGACA TACAAGGGAG ATTTTCAAGA TTGGCGTGTG AAGTATGTCC GAGTTCCTCG CTCAGTCAAT TTGGTTTCGA ATGCTTACCT TCAGTTTTTG CAAGGCCCAG GGACAAAGAT GTTATTCGAT TTTGTTAAAG AAATGCCTAA ACAAGAAACT AGGCTTCGCA TGGACATGGC GTCTCTCATA GGCCCCATTT TCTTCACATG GGTTATTCTT CTTTTGTTCC CTGTGATCTT GACCTCATTG GTGTATGAGA AGCAGCAACG TCTAAGAATT ATAATGAAAA TGCATGGCCT AGGAGATGGT CCATATTGGA TGATAACCTA CGCCTATTTT CTCGCCATAT CCACGTTATA CATTATATGT TTGATGATAT TTGGGTCAGC AATAGGACTG AAGTTCTTCC GGTCCAATGA CTACAGCATC CAGTTCATTT TCTATTTTCT TTATATAAAT CTGCAAATCT CCATAGCCTT TTTAGTTTCC TCAGCATTTT CAAAGGCTGT GACAGCATCA GTTGCTGCTT ACATGTACGT GTTTGGATCT GGGCTATTGG GCGGGTTCCT CTTCCAGTTT CTGATGGAAA GTTTATCGTT TCCTAGACGC TGGATATTTG TCATGGAATT TTATCCCGGC TTCTCATTAT ACCGCGGGTT GTATGAATTC TCCCAATATG CTTTCCAAAG AAACTTGAAT GGGAGGGATG GGATGAAGTG GAAAGATTTC AGAGGTAGTG CAATGGATGA AGTTTTCTCT ATCATTATCG TTGAGTGGTT TCTCGCACTC ATTGCAACAT ACTGCATGGA CCGAGTTTCG TCATCAGCGA AAGACCCTTT TGCATTCTTG AAAAACCCTC TCAAGAAATC TTCTTCTCCA CAAAGGCCTA GCTTGCAAAA AGAGGAATCT TCCGTTTCCG TAGAATTGGA GAAACTGGAT GTCATTCAGG AGAAAGAAAA GGTCCAGCAG TTGATGCTTG AGCCGAGCAC AAGCCATGCG ATTGTATGTG ACAACCTGAA GAAGGTGTAT CAAGGCAGGG ATGGGAATCC GCCTAAATTG GCAGTTTGTG GCTTATCTCT CACTGTGCCG TCAGGAGAAT GTTTCGGCAT GTTAGGGCCC AATGGTGCCG GAAAGACCTC GTTCATCAAT ATGATGACTG GACTTGTGAA ACCAACATCA GGATCAGCTT TTGTTCAAGG TTTAAACATA TGCAAGGATA TGGACAAAGT ATACACCAGT ATGGGTGTTT GCCCACAACA CGACTTGCTC TGGGAAACAT TGACAGGGAA AGAACATCTT TTCTTTTATG GAAGACTTAA GAATCTCAAA GGCCCTGATC TCGACCAAGC TGTAGAAGAA TCACTTAAGA GTGTGAACCT ATTTCGCTGA GGAGTTGCTG ATACACCTGC TGGGAAATAC AGCGGAGGAA TGAAAAGGCG GCTAAGCGTA GCCATTTCAC TTATCGGGAG TCCTAAGGTT GTTTATATGG ATGAGCCAAG CACAGGACTT GATCCGGCTT CAAGAATAAA CTTATGGACA GTCATCAAAC GCGCAAAAGA ACACACAGCT ATAATCCTTA CAACTCATTC AATGGAAGAA GCAGAGTTTC TTTGTGACCG ATTGGGGATT TTTGTTGATG GAAAGTTACA ATGCATAGGG AATCCAAAAG AGCTGAAGAA AAGGTATGGT GGATCCTATG TATTAACAAT GACAACATTA CCAGAACATG AAAAAGATGT TGAGACGTTG GTTCAAGATG TTTCCCCAAA TGCAAAGAAG ATATATCACA TCGCTGGGAC TCAGAAGTTT GAGTTCCCAA AGGAGGAGGT TCGCATCTCG GAAGTGTTTC AGGTGGTGGA GAAGGCCAAG AGCACTTTCA GGGTGTTTGC GTGGGGACTT GTGGACACAA CTCTTGAAGA TGTTTTCATC AAGGTTGCTA AAACCAGTCA GGCCTTTAAT GTCTTCTCTT GA 
Length2652
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12789066.. 12793919
Download Sequence
A.thaliana
AGI-codeAT3G47770.1
DescriptionABC2 homolog 5
TAIR curator summarymember of ATH subfamily
Alias[ABCA6][ATATH5][ATH5][ATP-binding cassette A6][A. THALIANA ABC2 HOMOLOG 5][ABC2 homolog 5]
Gene coexpression
MR
MR Locus Description
3 Ahg337685 histone acetyltransferase of the CBP family 4
12.6095 Ahg328883 SKU5 similar 10
21.1424 Ahg900378
21.3542 Ahg316907
21.4476 Ahg890578 HSP20-like chaperone
22.4499 Ahg924156 DNA-binding storekeeper protein-related transcriptional regulator
25.4755 Ahg478640 ubiquitin-conjugating enzyme family protein
31.0805 Ahg318936 Domain of unknown function (DUF26)
32.5115 Ahg906766
35.4965 Ahg939831
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression