Detail



ID : Ahg328883

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328883|fgenesh1_pm.C_scaffold_7001110
Sequence
ATGAGGTGGT GGCTAAACGG AGGTGTTTGG ATGATGATGA CAACGACCAT CATTTATTTT GTTAAAGCTG GAGATACCCT TTTTTACAAC TGGAGGGTCA CTTACGGCGA AATATCTCTA CGTACTTTGC CTCGAAGGGG AATCCTAATA AACGGACAAT TTCCTGGACC GGAGATTCGC TCACTCACCA ATGACAATTT GGTCATCAAT GTTCACAACG ATCTCGACGA GCCCTTTCTC TTATCGTGGA ATGGAGTGCA CATGAGGAAA AATTCGTACC AAGATGGAGT GTATGGGACG ACTTGTCCAA TCCCACCAGG CAAGAATTAC ACTTATGACT TTCAAGTCAA AGATCAGGTC GGTAGTTACT TTTACTTCCC TTCCCTCGCA GTCCAAAAAC TGGCCGGTGG TTATGGCAGC CTCCGTATCT ACAGCCTCCC TCGCATCCCC GTCCCTTTCC CTGAACCCGC AGGAGATTTC ACCTTCCTCA TAGGCGATTG GTATCGACGT AACCATACGA CTTTGAAGAA AATTTTGGAT GGAGGACGCA AGTTACCGAC GATGCCTGAT GGGGTTATGA TCAATGGCCA AGGATTAAGT TCTGTTTATT CTATCACCGT CGACAAAGGT AAAACGTACA GATTCAGATT ATCAAATGTA GGGCTTCAAA GCTCCCTCAA TTTCGAAATA TTAGGTCATC AGCTTAAGCT CATTGAGGTC GAGGGAACCC ACACGGTCCA ATCCATGTAC ACCTCCCTCG ACATTCATGT TGGTCAAACT TACTCTGTCT TGGTCACCAT GGACCAACCT CCCCAAAACT ACTCCATAGT CGTTTCCACA AGATTTATCG GCGCAGACGT TGGGGTGGGA TCCACTCTCC ACTACTCCAA CTCCAAAGGC CATAAGATTA TCCCTTCTCG GGCACCTGAT CCAAATGATA TAGAATGGTC TATCAAACAA GCCCAGTCCA TTAGGACCAA CCTAACTGCG TCCGGGCCAA GGACCGACCC TCAAGGCTCG TACCATTATG GTAAAATGAA GATTTCTAGG AATTTAATAT TGGAAAGCTC AGCGGCTCTT GTGAAAAGAA AGCAACGCTA TGCCATTAGC GGTGTCTCGT TCGTGCCTCC GGATACTCCG CTGAAGCTGG CGGATCATTT TAAGATAAAA AATGTTTTTA AAGTCGGAAG CATCCCTGAC AAGCCGAGAA GAGGAGGAGG GATGAGGCTA GACACATCAG TGATGGGAGC ACACCACAAT GCTTTTCTTG AGATCATCTT TCAAAACCGC GAGAAGATAG TCCAAAGTTA CCACCTCGAT GGATACAACT TTTGGGTTGT TGGGATCAAT AAAGGAATAT GGTCACATGC GAGCAGACGA GAGTATAACC TCAAGGATGC TATTTCTCGC TCCACTACTC AAGTATATCC AGAATCTTGG ACAGCTATAT ATGTGGCATT GGACAATGTG GGGATGTGGA ATCTAAGGAG CCAGTTCTGG GCGAGACAAT ACTTAGGTCA ACAATTCTAC CTTCGAGTTT ATTCTCCAGT TCACTCTCTC AAAGATGAAT ACCCTTTGCC CAAAAATGCT TTGTTGTGTG GTCGGGCCTC CAACAAAAAT ATGTCCATCA TCACTCCTTA G 
Length1641
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5497007.. 5499363
Download Sequence
A.thaliana
AGI-codeAT4G28090.1
DescriptionSKU5 similar 10
TAIR curator summary
Alias[sks10][SKU5 similar 10]
Gene coexpression
MR
MR Locus Description
12.6095 Ahg485138 ABC2 homolog 5
13.4907 Ahg915082 AAA-type ATPase family protein
15.7162 Ahg358814 Acyl-CoA N-acyltransferases (NAT) superfamily protein
29.8998 Ahg334832 HCO3- transporter family
32.4037 Ahg474736
35.0143 Ahg496153 AP2/B3-like transcriptional factor family protein
37.5766 Ahg896141 tetraspanin14
39.4335 Ahg929024 Basic-leucine zipper (bZIP) transcription factor family protein
44.4972 Ahg323049
45.2327 Ahg914989 NAD(P)-linked oxidoreductase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression