| Annotation |
|---|
| Description | jgi|Araly1|337685|fgenesh1_pg.C_scaffold_1004250 |
| Sequence |
ATGAATAATA ATGTTCCTCA GAACTCTGTT GCTGTTGCGA GACGCACTGC TTTAAGAAAT AGAATTTATG CTATCGTAAA ACACAAGCAG CAGCAGCAGC ATCAAATCTT TCTACACAAG AAGAATCAGC AGCCCACGCA AGATGCTATC TTAGAGAAGC AGGATCAAAA GTGTATTGCC GCAACAAGAA TGATTGAGGA AAAACTCCTC AAGTCTTCCC GATCATTTGA TGAGTACTCC GATTTAACAA CTTTTGACGC TCGTGTACAA ACTATGTTGC AACAGCTTGG AACAATCCTT TCTCAGCGGC GTGCTGCCAT GAATAATGGA GGGGCTCAAT GTATTACACC TACCCGCGCG GTCCATACTT CCACGAGCGT TAGTAACAAC TCTTTCCAAT CCGGAAGAAG CCTTGTGCCA ATTAATTGCA CCACTGCAGC AGCTGGAGGA TTATTTTCTA TTGGGCCTGA CATGCACACA CACCATTCTA CTGGTGCTAA TCACCAGATG GTTGAAGTTA ATAGGCCAAA TATGAACCAA ATTACTTGTG GGATCTCTAG TCCTCTGATT ACTGGATTTA ACGGCAACTG TGTACCAGTT TCTGCTAATA TACCCATGAC TTCTCAAGAC CTCTTCAATG CTACACTTCT CAACTGTGTA CCACCTGATC AGTCACACAT GCATAGATAC TCAATGAGCA ACGTTGCTTC TTTTGGTCAA AGTAATCCCT ATCCCTGTGG AATTGTTGTG TCATCTAGCT CAATGGCAGT TTCTCAGAAT TCAACTCCAT GGAACCCCAA TCCTATGCAG GGACTTGACG CTACCGTCAC AAGTTATCAC TCAAACCTGC AACCAATGCA ACAAACCCCA TTGCCAAAAC GTCAACTACA TCATCCGCTT TGGAATACTA ATTTCCAATC TGCTCCCAAT AACAGAGAAA ACTTGCCTCA GGTCAGTCAA CAACTCTTAA ATCATGGGTC TCACCAGCAC CGAGGACAAC ACTCCCAAAA TCTTTATCCT GGCCAACTCC AGAACCAAGA TCATTTACTT CCCAATCTGA CTCAGCAAGC TATGGCTTTA GCTGCTCCTG TCATGCATGT ACCAAGCTTG GAATCCTACG AAGAAGCTCT TCAGAAACAT GCTACTAAAA ATGGATTCAA ACCATCCAAG TTGCAGTGCC AACAGACTGC TGTTCAAGAC CATTACATTG GTGCTCAAAG TGTATCTGTC CACAGTAGTC AGATGAATTC TTCTCCATCT TTGCAACCAC ATCCTCATCA AAAGCAGTCG GAATCAATCC CGGTTCAAAG GCAGACATCT CTACAGAACT CAACTGAAAT ATTACAAAAC AATAATGGAC AGAGAGAACA TACTCATATG CAGCCTGAAC CTGTCCATCG TGTCTCATCT CCAATAGCGC CTATAAACAG TCAAACTGTT TCTCCTAGAA ATACTGTTGA GAGGAAACGT CCTCGGGATG GAAACGATAC ATCAAGTAAA CAGGTTAATG AAGATTGTGG TCAAACGTCT TCGAACACCG TTCTGCGGTG GATTCCGTTT ATGTTCCATG CACGTCATTG CAAGGCTAAG AAAGATAAGT GTGCGAGCAA GTTTTGCTTT CAAGCCAGAA AGATAGTGAA ACATATAGAC TGCTGCAAGG TCCCTAACTG CAAATATAGA TATTGTCTTG GTACTCGGAT GTGGTTAGAT CATTTCAAGC AGTGCAAAAG CATATCGTGC CGTACCTGTG TAGCTGTCAG AGAATACATG GAAAAGAATA AATACACAAT TGTACCTCTC CGTAGAGCTA AGTGTAGCTC AGCTAGTTCG AAATGTCAAC CCAAGAAATC CTCAAAATCC AGGAAAGCAT ATAAAAAAGG AGGTGCTGAA GCTCCATCTG TTGATGCTGA TCTGCAACGC TCAATCAAGC GCCCAAAATT ACAGCGACCC TCCCAAAATA TCACTCCCGA GACGAAGAGC ATTTCGGTGA CAGGATGTGG TGTTGTTTGT AAACCTCATT CCTTAATGAA TATGCAAGAG AAAGATGGTT TGCAAAGCCT CAAAGTTGAG GCTATGCCTA TGGACATAGA TGTTCCTGAT GCTTCTGAGA TTCCCGTTAC CAGGGAGCTG GTGAAACATG TTGCTGAAGA TACTCCCAAG GGTAATAATT GTGGTGGTTT TGTTATGGAT GAAAAAACTA GTTGCTTATT GGCACAAGGG AAATCCAAAT GTATGAATGA AATGAGTGCA CCAAAGGAAG AGAATGTGAA ACAGTCTGTG GAAGTTGTAG ATGCGTCTAA GATGGAAATC TCCTCACTTG TTGAATTGTT TACTCCTGAG CAAGTAAAGG AGCATATCCG CAGTCTTCGT CAGTGGGTAG GACAGAGTAA AACCAAGGCA GACAAAAACA AAGCAATGGG GTGCTCCATG TCTGTGAATT CTTGTCAGTT ATGTGCTGTT GAGTGGCTTG TATTTGAGCC AGTACCTCTC TACTGCTCAC CTTGTGGTAT ACGCATCAAG AAAAATGCCT TGCACTATAG TATTGCGGCT GGTGAGTCAA GGCATTATGT ATGTGCACCT TGCTACAATG AAGCGCGTGA AAACTTGGTT TTTCTTGATG GAACTTCTAT ACCGAAAACA AGGCTTGAGA AAAAGAAAAA TGATGAACAA GTTCCGGAAG GGTGGGTGCA ATGTGATAAG TGTCAAGCAT GGCAGCATCA AATTTGTGCT TTGTTCAACA GCCGAAGAAA TCATGGCGAA GCCACCAAGT ACACTTGTCC TAATTGCTAT ATACAAGAGG TGGAACAAGG AGAAAGAAGA CCATTACCAC TAAGTGCTGT TCCGGGGGCA ACAAATTTAC CAGTTACTGC TCTTAGCAAC CATCTAGAGG AGCGGTTATT CAAAAAGTTG AGGGAGGAAA GACAAGAGAG GGCTAGACTT CAAGGAAAAA CTTATGAGGA GGTCCCTGGA GCTGAATCAC TTACTGTCAG AGTTGTGGCA TCGGTTGATA AAGTATTAGA AGTAAAGCAA CGTTTCCTTG AGCTTTTCCG AGAAAAAAAT TATCCAACTG AGTTCCCTTA TAAATCCAAG GCCATTTTGC TGTTTCAGAA GATTGAAAAT GTGGAAGTAT GCTTATTTGG TATGTTCGTC CAGGAATTTG GGACAGACTC TGGACCTCCC AATGAGCGGC GGGTATACCT TTCTTATCTG GACTCTGTTA AGTATTTCAG ACCTGAGGTT CGAACTGTGT CTGGAGAAGC CCTTCGCACC TTTGTGTACC ATGAAATTCT GATTGGTTAT CTCGATTATT GTAAGAAACG TGGTTTTACA AGCTGCTATA TATGGGCATG TCCTCCACTT AAGGGTGAAG ATTACATTCT TTATTGTCAT CCTGAAATCC AGAAGACTCC AAAGACTGAC AAACTAAGGG AATGGTATTT GGCAATGTTA AGAAAAGCTT CAAAAGAAGA TGTGGTCGTT GAATGCACAA ACCTCTACAA TCATTTTTTT GTCCAGTCTG GTGAATGTAG AGCTAATGTA ACTGCTGCAA GGTTGCCATA TTTTGATGGA GACTACTGGC CAAGTGCTGC TGAGGATTTA CTACGCCAAA TGAACCAAGA AGATGATGGT GAGACAAAGT TAAATAGAAA AGGATTGACC AAAAAGGTCA TATCGAAAAG AGCCCTAAAA GCCGTTGGCC AGTTGGACCT TTCTCTTAAT GCCTCCAAGG ATCGACTTAT GATGCAAAAA CTCGGTGAGA CCATTTGTCC GATGAAGGAA GATTTTATAA TGGTTCATTT GCAACATTGC TGCAAGCATT GTACCACTCT CATGGTATCT GGAAACCGGT GGGTGTGCAA TGAGTGCAAG AATTTTCAGA TCTGTGACAA GTGTAATGAA GTGGAACAGA ACCGCATAAA TATAGAGAGA CATCCGATTA ATCAGAAAGA GAAACACGCG CTATTTCCCG TGGCCATCAA AGACGTTCCC GTCAAGATTG AGGACACAGA TGACAACCTG GAGAGCGAAT TCTTTGATAA CAGACAAGCT TTCTTGAATC TTTGCCAAGG AAATAACTAT CAGTACGACA CTCTAAGGTG GGCCAAACAT TCTTCCATGA TGATTCTCTA TCATCTTCAC AACCCAACTG CCCCTGCATT TGCTACATTT TGCACCATCT GCCAACAAGA AGTTGAAAAC TCTCAAGGCT GGCACTGTGA AGTTTGTCCG GGCTATGATG TCTGCAGTGC CTGTTACTCG AAGGCGTCTA TCAACCATTC ACATAACCTG ATAAACCGTT CATCTTCTAC CGAGAGTCCT GTTGTACAAG AGAACAGGCA AGCTAGTCAA AATTATCAAG TCCAGCTAGA GAAGTTAAAA GAAGTGCTGG TACATGTAGC TGCATGCCGC TCTACACTGT GCCAATATCA AGGTTGTCGT AAGTTTAAGA CCTTCTTCAG ACATTGTATA GCATGTAAGA CTGGTCCTGG ACGTTGCCCC CATTGTAAGA GAGTTTGGAA TCTCCTCAGA CTCCATGCCC GCAGCTGTAG AGATTCCCAA TGCACTGTCC CCAAATGCAG AGATTTCAGA GAGATTAGTA GTAGGCAGCA GCAGCAGTCG GACAAAAGGC GTAGAGCTGC TGTAATGGAG ATGATGCGGG AAAGGGCCGC TGAAGCCACC CGCACTGGCT AA |
| Length | 4692 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 28161269.. 28166437 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G55970.1 |
| Description | histone acetyltransferase of the CBP family 4 |
| TAIR curator summary | HAC4 is most likely to be an expressed pseudogene that lacks HAT function. there is a single nucleotide deletion in both the HAC4 genomic and cDNA sequences relative to its homologs. The resulting frameshift within the open reading frame causes a stop codon to occur within the predicted acetyltransferase catalytic domain. |
| Alias | [HAC04][HAC4][HAC6][HAG04][HAG4][histone acetyltransferase of the CBP family 4][HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6][HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04][HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4] |
| Gene coexpression |
|---|
| MR |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
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| Growth Chamber expression |
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