Detail



ID : Ahg485276

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485276|fgenesh2_kg.5__1268__AT3G49180.1
Sequence
TAGATATCAC AAAACCCAGA CTTTGGAATC AGTTTCTCTT TTTTTCCCTC TTTCTCTTAG CGATGGAGAT TTCTGTTATC GCTTCATCGT CAATCGATGA AGGAATTGGA AGCTGGGATC TCAAAACCGG GAATGAGCAG CTTCGTTTCA AGCAGTGTGC TTCTCCGGCG CATGGTCTCA CCGCCGTCGG CGAGAAATTC CTCGCCTCCT CTCAGCTCCG TAAAGAATCT ACTTCTTCTG GCTCGATTTT TTACTGGTCT TGGACTAAGC CTCAAGTTGA AGTGAGGAGC TTTCCAGTGG AACCAATAAA GGCTCTTGCA GCAAACAATG AAGGAACTTA CTTAGTTGGT GGTGGATCCT CCGGAGATAT TTACCTTTGG GAGGTTGCGA CTGGGAAGTT GCTTAAGAAG TGGCATGGTC ATTATCGTTC AGTGACATGT TTGGTGTTCT CTGGAGATGA TTCTTTGTTG GTTTCAGGAT CTCAAGATGG ATCTGTTAGA GTTTGGTCTC TTATAAGGCT ATTTGATGAT TTCCAGAGGC AGCAAGGGAA AACTCTTTAT GAACATAATT TTAATGAGCA TACAATGTCT GTGACAGACA TTGTTATTGA TTATGGAGGC TGCAATGCTA TGATAATTTC TGCTTCGGAA GATCGGACTT GCAAGGTTTG GAGCTTGTCA AGAGGGAAAT TGTTGAAAAA TATCATTTTT CCTTCAGCCA TCAATGCACT CGCGTTGGAC CCTGGCGGGT ATGTGTTCTA TGCTGGTGGT AGAGATGGCA AAATTTATAT CGGTGCCATT AATGCCACGA GTGAATATGG GACACAAGTT CTAGGTTCAG TATCCGAACA AAGCAAAGCT GTTACTTGCT TAGCATATTG CACAGAGGGA AACCTTTTAA TTTCTGGATC AGAAGAAGGT GTGGTTTGTG TTTGGGATCC CAAATCACGT CGCCCTGTTC GTACTCTCGG CCGTGGAAAA GGAAAAGGTC CTCCTGTGAA CAATATTCAA ATTGTTAGAA AAACGATTGT TGATAATTCC AACAAAACAC AATCTTCCTG GAAAAGACGT GGGTCTTTGA TGCCACCGCC TTTGGAAAAA TATGAAAGAT CAGGAGAAGA TACTATGGAT GGTATCGTTA CCGTTGATCC ACCCCCATTT TCTGATGTTC CTGTTTACTC TTCTTTCCTC AGCGCTGACC TTATTGACGA GCAAGTTAGA GAACTTCAGC AACAAGGCTC TGCAGCAACA GAGATCGAAA TGGAAAGACT GAAACTTGAA TACAAAAGAT CTTTACAGAT GAATGATCAA TGGCAGAAGA ACTATGAGAA TTTGCTTCAG GTGGTTATGG AAGAAGAACA AATCGGTGGT TCCAATTGAA AGCTTTTATT GTTGTTTCTA CACATTTTTG GAATTATATT GAGAGATAT 
Length1429
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13621121.. 13623254
Download Sequence
A.thaliana
AGI-codeAT3G49180.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias[RID3][ROOT INITIATION DEFECTIVE 3]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg917558 P-loop containing nucleoside triphosphate hydrolases superfamily protein
4.47214 Ahg329184 MA3 domain-containing protein
5.19615 Ahg358424
15.0333 Ahg470361 prohibitin 2
19.4422 Ahg480608 CCAAT-binding factor
25.9808 Ahg921543 Ribosomal protein L16p/L10e family protein
38.1838 Ahg893505 NAD(P)-binding Rossmann-fold superfamily protein
42.6615 Ahg927080 Small nuclear ribonucleoprotein family protein
44.6766 Ahg928806 Zinc-binding ribosomal protein family protein
45.5961 Ahg931375 Ribosomal protein L4/L1 family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression