| Annotation |
|---|
| Description | jgi|Araly1|485283|fgenesh2_kg.5__1275__AT3G49250.1 |
| Sequence |
GATTCTCCGG TGATAACATT GAAGCTGAGG AGCAATGTAT CCGAATGGTC AACAGATTTC GTTTCAGACC ACTCCTTTGA ATGTTCAAGA TCCAACAACG ATGATGAATT TGGGTCAATC TTCACCAGTT CCAAGAGATG TAACTCAGAA TGGAGGAGTA GGAGGAGGCA TTGCTCACGC TGAGTTTGCT ATGTTCAATT CCAAGAGGCT TCAATCTGAT CTTGAAGCTA TGGGTAACAA ACTCAAACAG CATGAGGATA ATCTCAAGTT TCTCAAGTCA CAGAAAAACA AATTGGATGA AGCAATCGTC GACTTGCAAG TTCATATGAG CAAGCTTCAT TCGTCTCCTA CTCGTAGAAG TGAAAATTGT GATAACAATC TTCAGGGTGA AGATATTAAT GAACAGATCC TTCGCCACGA AAACTCAGCT GCTGGAGTTT TAGGTCTGGT TGAGACTTGT CATGGCGCGC AGGCTTCTCA GTTGATGTTG ACAAAAGGTG TTGTTGGTGT TGTAGCGAAA CTTGGGAAGG TCAATGATGA AAATCTCAGC CAGATTTTAT CGAATTATTT GGGGACTCGC TCAATGTTGG CAGTTGTATG CAGGAATTAT GAAAGTGTTA CGGCTTTAGA GGCTTATGAT AACCAAGGCA ACATTGATAG AAATGCTGGC CTTCATGGCC TTGGCGCTTC GATTGGCAGA ACCATTGGAG GCAATTTTGA TGCCATCTGC CTTGAAAACC TGAGGCCGTA CGTTGGTCAG CACATAGCTG ATGATCTGCA AAGAAGGCTT GATCTTCTGA AACCAAAATT GCCTAATGGT GAGTGTCCTC CCGGGTTTCT TGGATTTGCA GTGAATATGA TACAAATCGA TCCGGCTTAC TTGCTCTGTG TCACATCATA TGGACATGGT CTTCGTGAGA CCTTGTTCTA CAGTCTATTC TCTCGCCTTC AAGTTTACAA AACAAGGGCC GATATGATTA GTGCCCTCCC ATGCATAAGT GATGGTGCAG TATCTTTGGA TGGAGGAATC ATCAGGACAC CGGGGATCTT CAATCTTGGA AACCGTGATG AGGTGAATGT GAGATTTGCA AAGCCAACTG CTTCACGAAC GATGGACAAC TATAGTGAAG CGGAGAGGAA AATGAAAGAG CTGAAATGGA AGAAGGAGAA AACGCTGGAG GACATTAAGC GAGAGCAAGT GCTTCGTGAG CATGCTGTCT TCAACTTTGG CAAGAAAAAA GAAGAGTTTG TTCGATGCTT GGCTCAGAGT TCATGCACTA ATCAGCCAAT GAACACACCC AGATGAAAAG AGAGCAAGCA AAGAAGCACG GAGCTCGGAG TTACAGTGAC CCTTGCTTCT AAAGGAATCC TATTTTGACT ATAAGAACTT GTTTCCAGCT TAGTTTTTGA TAGATTGCTT CCATGATACT AGATTTAAAT AAATTTCCTT GAAGGGTAGT AGATCGGTTA GTTTTGGTTT CTGTTTTGGT TTTGACTTGA CCAGTTTACT GTGTACATAA TC |
| Length | 1522 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 13657919.. 13660459 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G49250.1 |
| Description | defective in meristem silencing 3 |
| TAIR curator summary | Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation. |
| Alias | [DMS3][IDN1][DEFECTIVE IN MERISTEM SILENCING 3][INVOLVED IN DE NOVO 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg946699 | RNA polymerase II, Rpb4, core protein |
| 10.7703 |
Ahg477982 | PAPA-1-like family protein / zinc finger (HIT type) family protein |
| 14.1421 |
Ahg497283 | Protein of unknown function (DUF740) |
| 15.5885 |
Ahg482469 | urease accessory protein D |
| 32.1248 |
Ahg338172 | Mitochondrial transcription termination factor family protein |
| 34.641 |
Ahg925396 | TRAF-like family protein |
| 44.2719 |
Ahg335142 | IQ-domain 30 |
| 49.8397 |
Ahg493541 | Inosine triphosphate pyrophosphatase family protein |
| 50.0999 |
Ahg496597 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 50.9117 |
Ahg495101 | cyclopropyl isomerase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|