Detail



ID : Ahg485327

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485327|fgenesh2_kg.5__1319__AT3G62080.2
Sequence
TGTGAAGGAG TTCCAGATTG GGACGATGAG GTGGTGGCGA CGGCCAGATT CAAGGCGTTT AGTGGGCAGA GATCCGATTG GGAACTTAAA TTTCAGTTTT GGCGTGATTT GATCCTCAAG GTTTCGCGTC AGTTTGGGTT GTTCATCATT GATCCTGTTC AGGTGAAGAA GGCGTGGTTT AATCGAGGAG GAATAACGCC TTTATGCATT GATCATGTTC TGTTATTGAT GCATAGTGAA GGTGATGTTG TGCGGATTAG CGATCTTGAT GATCCGAGTA TTGGCCGTAT TTCTCGTTTA TTGAGGACAG TGAGGAACTT GATGGTTCAA CAGTCAGTGA AGCAGGAAGA GATTCTGGAA ACTAAACTTG TTATTGTACC ACTCTTGAAG GAGAAGGCGG GTGATGTGGT TAATATTTTA TCTGAGGGAC ACTGGACTTC TACTTGTGTT GTCACGCTGA AGAAGTTTCA GAATTTGTGC AACGGCTCGA ATGAGGCATC TGCTGTTTTG AGTCACTTGT CAGGGTGTGG AAAAGCGCAT AAAATCTCTA TCAATCAGGG AGAACTGATC GAGGGCGTTA AAGTATCCTT TTCACAAGCA GCACTTCCTA GCATCTCAAC TTTAGATTGT GATATTCTGC ACTTGCTAAG GACTACAGAA AAGCTCCACG ATCAACTTGA AGTGATGGAC CAACGTTGTG AAAAGTCAAA GAAATCAGCG CTGGCATCTC TAAAGTCTGG ACACAGGAAA GTTGCTCTAA GGCATGCAAG GGAATTGAAG TTGGCGACTG AGAGCAGAGA AAAATGCACG TCACTTCTGA ACAGAGTAGA AGAAGTGTTG AACACTATAG CGGATTCTGA ATCTACGAAA ATGGTCTCAG AAGCAATCAA AACTGGAGCT AGGGTCATGA AGGACATCAA GATCAGTGCA GATGATGTTC ATGACTATTT AGAAGAACTT GAGGAAACTA TTGAATCACA GAAGCAAGTC GAAAAAGCTC TCGAATCCGC TCCATATCCA GATACTGATG ATGAAAATTT CGAAGAAGAA TTACTGGAAT TAGAGATGGA CCTTGAAAGT GAAAGTTCTC AAGTCCTACC AGCGACTTTA GATACTGCAG ATTCACTGAC TGAGATGTTC TCAGAGCTTA AACTTGGCAA GACGAAACAA ACATTGGAAG AGCAAGCTAC TGAGCCAGCT CGGATGAAAG ATAGCGGAAA AAAGATTCTT GAAGCAGCAT AGCTGAACAA TGCATCTTCA TTGTGGTGCG ATCTCTTCTC TTCTTGTTGT ACTTAAGAGA AGAAATACAC TCGGTATCAT ATAGATAGAA TAGAACCGGG TAAAGTGAGT TGAGTATTTG TATGCTATGC CTCTTGTTCG GATTCTAGAA ACAAGAGCTT CACTCCATTG TATAAAGTCG AATGATGATT TTGATCACTC CGATAGTGGT TGATAATTTA TTAATGTTTC T 
Length1471
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19519813.. 19522121
Download Sequence
A.thaliana
AGI-codeAT3G62080.2
DescriptionSNF7 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
41.0488 Ahg482594
50.7543 Ahg476947 Galactosyltransferase family protein
82.9759 Ahg890100 double-stranded RNA-binding domain (DsRBD)-containing protein
87.9432 Ahg926758 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
95.9844 Ahg940081 Pentatricopeptide repeat (PPR) superfamily protein
97.0258 Ahg324861 peptide transporter 5
97.5346 Ahg920054 Flavin-binding monooxygenase family protein
98.1479 Ahg889612 peptidoglycan-binding LysM domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression