Detail



ID : Ahg485559

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485559|fgenesh2_kg.5__1551__AT2G05850.1
Sequence
AGAATGGGAA AACGACATGA TTGGTCCCTG ACCGCTTGTA TTTTCCTATT ATTGTCTCTA GCATTACAAA TCCATTGTAG TAGCCAAATA CGTTTTCCAA GTCATAAGCG AGGAGTTGGA TTGTCAGGTG ACACAAGCCA CTTCAATTCT ATTCGTCGCG AAAATGTGCT TTCGCTTAAG GAGAAAGATC TAATCAAGCA GCTCCCCGGA CAACCTTCCG TTAGTTTCAG ACAATATGGC GGTTATGTGG CCGTAAACGA ACCCGCCAGT CGGTTTTTGT ACTATTATTT CGTGGAAGCC ATCAAACCCA ATAAATCTAC TCCTCTTGTG CTTTGGTTCA ACGGAGGACC TGCCTGCTCA TCTGTAGGAC TTGGGGCATT TGAAGAGCTT GGTCCATTCC GCGTACATAG CGACGGCAAA ACGCTTTTCC GCAATCCGTA TTCATGGAAC AACGAGGCGA ACATGTTGTT CTTCGAAGGG CCGGTAACTG TAGGATTCTC GTACTCGAGT ACTCCATTTG ATGCGGAGAA ATTTGGGGAA CAAGGGGACA AGCTGACTGC AGAGGATAAC TACATGTTCT TTGTGAATTG GCTTGAAAGG TTTCCGGAAT ATAAAGGAAG AGAAATTTAC ATCGCCGGTG AGAGTTACGC CGGTCACTAT ATTCCCGAAC TTGCCCAGAT CATCCTTCAC CGTAACAAGC AAACCTTCAT CAATCTACAA GGCATTTTGA TTGGTAATCC AGGTCTGGAC GTACTTACCG AGCATGATAA TGAAAACGAA TTTATGTTAA GCCATGGTTT GGTTACCCAA AAAGATATTG AAGAGTCCAA TAAAGTCTGC CTTGGCGACT CATTCAATAT GGAAGAATGC ACAAAGATAA TGGTGGCTAA ATTTGATTAT ACAGACAGCA AAGTCTTGGA CATTTACAAC ATATACGCTC TTGTGTGCCA AAACTCCACG TTGAGCAGCG AACCCAAGAA ATGCACCACA ATAATGGAGG TTGATCCGTG CAGAAGCAAC TACGTGAAGG CTTATCTTAA CAGAGAAAAT GTTCAAGAAG CGATGCATGC CAACACCACA AAATTACCGT ACGAGTGGAA GTCTTGCAAT GAAGACTTGA ATTATTTATG GAACGAAACT GATAAAGATG CCTCAATGAT TCCTATCCTT CACGAGCTGA TGGGTAAGGG TGTCCGAGTC ATGATCTACA GTGGAGACGT GGACCTGGCG GTTCCGTTTA CAGCTACAGT GGCCGTGCTG AAGGAGATGA ATCTAACGGT TGTAAAGGAA TGGCGTCCGT GGTTTACCGG AGGACAGCTG GGAGGGTTCA CAGAGGATTA CAAAGGGAAC TTGACGTATG CAACTGTGAA AGGAGCAGGT CATATGGTTC CTACGGACCA ACCTATACAT GCTCTTAATA TCTTTACCAG CTTTATCCGT AACACTCCTC TCCCTCAAAC ACCCTGATTT GTAACTTGTA CCACCTCTAT TGACTGAACA AAATACTT 
Length1508
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15028140.. 15050298
Download Sequence
A.thaliana
AGI-codeAT2G05850.1
Descriptionserine carboxypeptidase-like 38
TAIR curator summary
Alias[scpl38][serine carboxypeptidase-like 38]
Gene coexpression
MR
MR Locus Description
20.9045 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
38 Ahg321478 Fatty acid hydroxylase superfamily
44.699 Ahg916047
52.5738 Ahg314348 Protein kinase superfamily protein
53.3854 Ahg921385
58.438 Ahg931891
61.6036 Ahg900122 RING/U-box protein with C6HC-type zinc finger
68.7023 Ahg483279 Protein kinase superfamily protein
71.1337 Ahg319861 GDSL-like Lipase/Acylhydrolase superfamily protein
71.7287 Ahg927569 Plant protein of unknown function (DUF946)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression