Detail



ID : Ahg485770

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485770|fgenesh2_kg.5__1762__AT3G53760.1
Sequence
CAATGTTGCA CGAGCTTCTT CTAGCTCTCT TAGGCTTCAC CGGCGATCTC ATCGTCGACG AGCGAGAGCA ACGGAAAACC CTAGGCCTCG CTTTCAACTC CGATTCACCT CTCTCTGATG AATGTACCTT CAAACTCGCT CCTGACATCT CCTTCATCGA ACCCAGCGAA AGGGACTTGA TCGAGAGGTT GATCAAGCTA GGGTTCTACT ATCGAGAGCT GGACCGGTTT GCGAAGAAGT CTCGCAATTT GAGCTGGATT AGGTCTGTGA CCAGTGTACA TCCGTTGGAA CGGGCTGATG AATTGTCGAA GCAGAGTAGA GAGAAGAAGC CTAGCGTGTA CCGTAGAGCC ATTGCTAATG GAATTGGGGA GATTCTTTCA GTCTATAGAT CTGCGGTTCT TCACATTGAA CAGAAGCTAT TGGCGGAGAC TACGCCTATT CTGGCTATGG TTACACAGGG GCTCAATAAG TTTTTCGTTC TTTTCCCGCC CCTGTATGAG GTAATTCTTG AGATTGAGCG TGATGATGTT CGTGGAGGGC AGCTTCTGAA TGTATTGAAT AAAAGGTGTC ATTGTGGTGT GCCTGAATTG AGGACTTGTC TTCAAAGGCT TCTTTGGCAT GGACATCAGA TCATGTATAA TCAGCTTGCG GCTTGGATGG TCTATGGGAT TCTCCAGGAT CCTCATGGAG AATTTTTCAT CAAGAGACAA GAAGATGGGG ATTTAGATCA CCGCTCATCT CAGGAAGAGA TATCTGAAAA GTTGGCTCGT ACCTCAGTTC ATGAGACATC TTTAACTGAT TGGCACTCTG GATTTCACAT TTCTTTGGAT ATGTTACCTG ATTATATTTC TATGCGTCTT GGTGAATCAA TTCTTTTTGC GGGGAAAGCC ATAAGAGTTT TGCGAAATCC CAGTCCTGCT TTCCAGTTCC AGAAGGACAA GAGTTTTCAG CAAACCATGG GTGGCTCCCA GAGAATTCAG GGATTTATGC ATAGTGATTT CCCTGAAACG GAAACTGAGT CAGATGCAGA TCTTACAGGG GGAGAGTTAC TTCCACAATC TGAGGCAGAC AAGATTGAAG CTATGCTCAA AGAATTAAAG GAATCATCTG AGTTTCACAA GAGATCATTC GAGTGTACTG TTGATTCTGT TCGAGCAATA GCAGCCAGTC ATCTTTGGCA GCTTGTCGTT GTGCGTGCTG ATCTCAGTGG TCATCTTAAA GCTCTGAAAG ATTATTTCCT CTTAGAAAAA GGAGATTTCT TTCAGTGCTT TCTGGAGGAG AGTCGTCAGT TGATGCGTTT GCCACCTCGC CAGTCAACTG GAGAATCTGA TCTTATGGTA CCGTTTCAGT TGGCTGCAAC AAAAACCATT GCGGAGGAAG ATAAGTATTT CTCTAGGGTA TCCCTACGGA TGCCGTCATT TGGAGTCACA GTCAGATCTT CTCAAGCTGA CATGGCGAGA TCTAAAGTAT CTCTCGCCGG GAAGGCAAAT CTTACATCAG ACACCTCTGT GGATGGCTGG GACGCTATTG CGTTGGAGTA TTCTGTTGAT TGGCCCATGC AACTGTTTTT CACTCAAGAA GTGCTTTCTA AGTATCTCAA GGTGTTCCAA TATTTGATAC GGCTAAAGAG AACTCAGATG GAATTGGAGA AATCATGGGC TTCTGTAATG CATCAAGATC ATATAGAATC TGCTCAACAT CGGAAAGATG GTATAAACGG ATCAACATCT CAACAAAGAA GACAAGGAAT ACGACCCATG TGGCGTGTTA GAGAGCACAT GGCATTTCTG ATAAGGAATC TTCAGTTTTA CATTCAGGTT GACGTGATAG AATCTCAATG GAAGGTGTTG CAAACTCACA TCCACGATTC TCAAGATTTC ACTGAACTCG TTGGCTTCCA TCAAGAGTAT CTCTCCGCTC TTATTTCACA ATCTTTCCTC GACATTGGTT CCGTCTCAAG GATACTCGAT AGCATAATGA AACTCTGTCT CCAGTTCTGC TGGAACATTG AGAGTCAAGA AAGCAATCCA AACACTTCGG AACTTGAAAA CATAGCTGAG GAATTCAACA AGAAGTCGAA TTCCTTGTAC ACCATATTGA GAAGCAGCAA ACTCGCCGGG AGCCAGAGAG CCCCGTTCTT GAGACGTTTT CTTTTACGCC TAAATTTCAA TTCCTTTTAC GAGGCAACTG CAAGGGGGGT GTTGAATGTT GTCCGACAAC GCCCAGCTCT TCCATTGTAA AGCTCATTTC GAAGCTTTTT CAGACATGAG CTATTGGTCT GATCCTCAAA CCAGGATCAC ATGTCGCCAC CAATGGAATA TACATAAATA TATGTTGACA GAGTTTTTGC TCACACGCCT TTCCTTTGTA AGAATCTGTG TGCTGTGTTT CATTCGTGCT TTATAGATGT ACTACTCTGT AAATTATGTA GGTGTGGTTT CTTTAATCAT TT 
Length2452
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15807836.. 15812255
Download Sequence
A.thaliana
AGI-codeAT3G53760.1
DescriptionGAMMA-TUBULIN COMPLEX PROTEIN 4
TAIR curator summaryEncodes GCP4 (gamma-Tubulin Complex Protein 4), required for microtubule organization.
Alias[ATGCP4][GCP4][GAMMA-TUBULIN COMPLEX PROTEIN 4]
Gene coexpression
MR
MR Locus Description
10.8167 Ahg339887 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
12.6886 Ahg921642
16 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
23.5584 Ahg476319 histidinol phosphate aminotransferase 1
24.0416 Ahg923061 NC domain-containing protein-related
25.9037 Ahg482629 demeter-like 1
28.4605 Ahg486409 crinkly4
29.8496 Ahg488304 domains rearranged methyltransferase 2
38.2623 Ahg488288 Pseudouridine synthase family protein
39.7492 Ahg925182 RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression