Detail



ID : Ahg485803

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485803|fgenesh2_kg.5__1795__AT3G54060.1
Sequence
TTCTTCAGGT CTTTTCAACT TCGCTCTCTC CCTCTCTCTC TATTGAATCA TCTTCGTGTT AACTAGGGTT TTCGATTTAT CAGAAGACAT AGCAATAATG GGGAAATCGA GCAGATCGAA AGGATCGAGT ATCATCGGGA AAGGTGAAGT TACCCCAACG CAAATTGCTT TTATCGTCGA TCGCTATCTC TACGACAATC GATTTTCAGA AACCCGAAAC CTCTTTAGAT CTGAAGCTTC TTCTCTCATC TCTAATTCCC CAATTCGCCA AGTTCCGAAT AGTTTGATGA CTCTTGATGC TATGTTGAAC CATTACGTAT CTTTAAAGGA GCAGAAAGTG AGTCTCGATC AAGAGAAAGT GAAATTGGAT CAGGAAAAAA TTAGGGTTCA AAATCTGTTG CAGGGGATGC AAAATGTGAT GAATTCGTAC AACGCTAGCC TCACCGCTCC TCCTCCTCCT CCTCCGGCTT CAGCTCCGAC TTTTCAACAG AAAATCAACA GCGTATCTTC TTCAGGCTTA ACTCAGTACA ACACACCAAA TGTTATGTCA GTATCATTGC TAGGTAACAA AAGAGTCGAT TTTCGGAATT TTTCCACACC TTCGACCAGT CAGTCTATTA CCGGGAAAAG AAAAGGTCCT GAAGTTTCTG TAAGAGCTCC TCCGGTAACT AGGAAAGCGC GGATTTCTAC AGCAACTGGG ACTAATAAGA TCTCACAAGC TGATAAAGCA GCTAACAATT TCTCATCCCA AACCCCATCT GAAACATTAG CGTTGGCCAA AAACTCTGCA ACTAATGAAT TGATTGGTCA TGGGTCAAGT GTGGTGAAGT GCTTGTTCAA TAAGGCTGAT TCCTCAGTTC CTACTAGTTC AACATGCCTT AGGACACCAC AAAAACATGC TTCTCCTGGG AGTGATAAGT CCAACAGTCC CCAGAAAGAA GTTACTCCTA CAAACTGCAC AATTGTTACA AAGGAGAGAT TCACAGTCAG TCCTCTCAAG CAAATTACTT CTTATTCAGT GGAAAGAAGC CATCTAATTT CTTGTTCGCC GGTCAAGTCT AACCTGAAGA TGTCAAATAA GAGAGACCAT GTGAAAGGAA AGCTCAACTT TGATGACACT GATACAGAAA TGTGCTTAGA GGCACCTGCC TCTACAGATT TAGTTTCAAC TTCTCCATCC GGGTCTGAGC CAGAAGTTGA TTTATTTGAC ATGGACTTTT CTAATCTGGA TTTCTTGGGT GAAAACTTCA CACTCTCGGA GCTACTAGTT GATTTCGATC TTGATTGTGA AGGAAGTACA AATCATTGCT TGTCACAGAC CCCAAATCAA CCCATTGAAA CTGTTTCAGG CTCCTCTCCT GAATCAGGGG ATGCTAATCT CGAGTCTGAC CAGGCCTTTT TGGAATATAC ATCAACCGTG ACTGAAGTGA TTCAAGGGAA AGACATGAGC AGTCAAGATA TTGATCATCT CCCTAACTCG AGCCATTCTT CTCTTAACAC AGCCAAGGTT TGAAGGAAGA GAGTGACATG ACAGACAATT GACTGATTTT GAAGACTACG ATTGACTCCA AGACCACCAA TGCACGATCC TCTACTTTTG CCTAACTATG CTGCTCAGTG CTAATACTTG TAATGGTCTG TGAAATATGA AAATGCTATC CCCTAAGTTC GCTCCTAATT AACTAGTATC TATTACATGT AGTTGTATAA ATTAAACTTG GATTTTTGGT CTATTGTTTT AA 
Length1742
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15920499.. 15922880
Download Sequence
A.thaliana
AGI-codeAT3G54060.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.2916 Ahg951260
24.2487 Ahg887530 RNase H family protein
31.4006 Ahg913771
36.0832 Ahg891470
49.7192 Ahg901934
53.8331 Ahg355494 Transcriptional factor B3 family protein
61.9839 Ahg948159 Pentatricopeptide repeat (PPR) superfamily protein
63.5767 Ahg476223 Polyketide cyclase/dehydrase and lipid transport superfamily protein
65.0538 Ahg492744 cysteine-rich RLK (RECEPTOR-like protein kinase) 28
79.1202 Ahg913250 somatic embryogenesis receptor-like kinase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression