Detail



ID : Ahg485830

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485830|fgenesh2_kg.5__1822__AT3G54320.1
Sequence
CAGGGTTTAT TTAACTTGCC CTTTCTCGTT TCCTCCTTTT TTTCTTAAAC CACTCTTCCT TCTTCCTCTG ATTTCCCAGA TTTTAATGAA GAGGCGCTTA ACCACTTCCA CTTCTTCTTC TTCTCCATCT TCCTCTGTTT CTTCTTCTAC TACTACTTCC TCTCCTATTC AATCGGAGGC TCCCAGGCCT AAACGAGCCA AAAGGGCTAA GAAATCTTCT CCTTCTGGTG ATAAATCACA TAACCCGACA AGCCCTGCTT CTACCAGACG CAGCTCTATC TACAGAGGAG TCACTAGACA TAGATGGACT GGGAGATTCG AGGCTCATCT TTGGGACAAA AGCTCTTGGA ATTCGATTCA GAACAAGAAA GGCAAACAAG GAGCATATGA CAGCGAAGAA GCAGCAGCAC ATACGTACGA TCTGGCTGCT CTCAAGTACT GGGGACCCGA TACCATCTTG AATTTTCCGG CAGAGACGTA CACAAAGGAA TTGGAAGAAA TGCAGAGAGT GACAAAGGAA GAATATTTGG CTTCTCTCCG CCGCCAGAGC AGTGGTTTCT CCAGAGGCGT CTCTAAATAT CGCGGCGTCG CTAGGCATCA CCATAACGGA AGATGGGAGG CTCGGATTGG AAGAGTGTTT GGGAACAAGT ACTTGTACCT CGGCACCTAC AATACGCAGG AGGAAGCTGC TGCGGCGTAT GATATGGCGG CGATAGAGTA TCGAGGGGCT AACGCGGTTA CTAATTTCGA CATTAGTAAT TACATCGACC GGTTAAAGAA GAAAGGTGTT TTCCCGTTCC CTGTGAACCA ACCTAATCAT CAAGAGGCTA TTCTTGTTGA AGCCAAACAA GAAATCGAAA CGAGAGAAGC TAAAGAAGAG CCTAGAGAAG AAGTGAAACA ACAGTACGTG GAAGAACCAC CACAAGAAGA GAAAGAAGAA GAGAAAGCAG AGCAACAAGA AGCAGAGTTT GTAGGATATA AAGATGAAGG GGCGGTGGTC AATTGCTGCA TAGACTCTTC AGCCATAATG GAAATGAATC GTTGTGGGGA CAACAATGAG CTGGCTTGGA ACTTCTGTAT GATGGATTCA GGGTTTGCTC CGTTTTTGAC GGATCAGAAT CTCTCGAATG AGAATCCCAT CGAGTATCCG GAGCTTTTCA ATGAGTTAGC ATTTGAGGAT AACATTGACT TCATGTTCGA CGAAGCGAAG AACGACTGCT TGAGCTTGGA AAATCTGGAT TGTTGCGTGG TGGGAAGAGA GAGCCCAACT TCTTCGTCTT CACCATTGTC TTGCTTTTCT ACTGACTCTG CTTCATCAAC AACAACAACA ACCTCGGTTT CTTGTAACTA TTTGGGCTTG TTCGTTGGTT CCGAATAATC AATGTCTTTG CCCCTTT 
Length1397
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G54320.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryWRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.
Alias[ASML1][ATWRI1][WRI][WRI1][ACTIVATOR OF SPO(MIN)::LUC1][WRINKLED][WRINKLED 1]
Gene coexpression
MR
MR Locus Description
7.28011 Ahg344326 RED family protein
10.8167 Ahg933989 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
10.8628 Ahg349549
11.225 Ahg916555
24.1868 Ahg487340 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
36.606 Ahg489201 Cox19-like CHCH family protein
38.3406 Ahg491484 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
56.4447 Ahg351421 Beta-galactosidase related protein
62.0081 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
62.1611 Ahg496787 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression