Detail



ID : Ahg485867

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485867|fgenesh2_kg.5__1859__AT3G54630.1
Sequence
TTTTAGGTTT TCCAAAATTC AAATTACAAA ATATTCCATC CCGCTTATCT GTAAAAAAGC AAAAAGAGAT GAGAGGAGGA GCCACGGGAA AGAGAAGAAC GACGGTGGGT TTCGGCGGAG CGCCGCCGCC ACCACCACCA TCAATCGAGC AACACCGTCA CCTCTTTAAC TCAAGAGACT CCGACGCCAG TTTCGCCAGC AGCCGTCCTT CATCAATCGG TTTAGGCGGC CGAGCCTCCG ATGACAGATC TTCGATGATT CGATTCACCA ACGCCTTTCT CTCCTCTCAT AACTCTCTGA TCTCTATCCG CGCTAATCCT GTTCCTTCTG TCAAAGACAT CTCCGAAACC CTAAAATTCA TTCTCTCCAA ATTAGATTAC CCTTGCGATT CCATCAAATG GGACGAGGAT CTCGTCTTCT TCCTCAAATC GCAGAAATGT CCATTCAAAA TCACTAAATC TAGCCTCAAA GCTCCCAATA CGCCTCACAA TTGGCCTACT GTTCTCGCCG TTGTTCACTG GTTGGTTGAG CTCGCTCGTT TCCATCAACA TCTATCATCC AATTCCACCT CTGAACCCGA AGCTAACTCC ATGAATTTCT TCGCGATTCA AAGCTTTAGT CACTTCATTC GCGGCGAGGA TGATAAAGTT AACGAGTTAG ATTCTGAATT TTTGGGTAAA TTGGAAGCGG AAAAGACTAG CGTCGCTGAA ACTATCTCTG GTTGTGAGAA AATCTCCGGT GAATTGGAGG CTAAACTTGA GTCACTGAGG AAAGGTCCGT CGAAGAAAGA GTCTCTGGGG AAAGCTAAAG CCGATTTGGA GAATGACGTG AACAAGTTCC GAACTATTGT TGCGGAATAT ACTGAAAAGA CTCAAGCGCT GGAGAAAGTT GTGGAGGAGA AAGTTAAGGA GCTTAAAGCT AAGGAAGAAG AGAGAGAGCG AATCTCTGAA GAGAATAAAG AGTTGAAGAA GAGTGTGGAC CTTCAGAACT TTAGCGCCAG AGATGTAGAG AGGATGAGAA GAGAGTTACA AGCTGTGGAA AGAGATGTTG CAGAGGCTGA GGTTGCTAGA GATGGTTGGG ATCTGAAAGC TTGGGAACTC AATTCACAGA TTGGGAATCA GTTTCATCAG ATTCAGACAC TTTCCATTGA TTGTAACCAA GTTCTTAGGA GATTGAAGCT TGATATTCAG TTCACTGTAA ATGAGAGAGG GAAAACACCT GCAAAGGTGA TTGGTGTGGA TTATAAATCT GTGGTGAAGC CAGCTCTGTG TTCGCTGTAC GATGGGATTA AAGGAAGCTT GACGGAGAAA ATGGAGGAGT TGGTCACTTT ACAGCAAGAG GTGTCTGAAA TGGCTTCGAA GATCGAATCC AAAAAGAGTC TTCTTGGGTC AATTCAGTTG CAGATCAATG AACTCGAAGA AAAGATGAAG TTGGTGAAGA AGGAAACTCA GGAGTTGACT ACAAAATGTG ACTTGGAAGC GAAAACATTG GTTGAGAGTG TGAAAACGGA GGCTTTGAAT CTGGAGGTTG TGGAGAAAGA AGCTGCTGAG TTTTTAAAAG CTTCGGAGGT AAGATTGCAA GAAGCAGAAA AGCAGAGTGA AGAGGAGGTC CAAGCATGTG CTGCACAACT ATTTGCACTT ATCGATTCGA TATCGAAACA GAAAGAGTAC ATGGATTTGA AGATATTGGA GATCAAAACT GGTGTTGCTG ATACTGCCAG TGCTGTTTCA GAGATATATA AAGCCAACTT CAAGAAGCAC CTAGGTATCT AGGGATTGGC ATCAACTGAG CCCAGAGATT GTTAAAAGCG TGAGTAATTC 
Length1820
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16147656.. 16149524
Download Sequence
A.thaliana
AGI-codeAT3G54630.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.9706 Ahg942855 Ribosomal protein L6 family
21.2838 Ahg488334 Gibberellin-regulated family protein
29.6648 Ahg494409 RAB GTPase homolog A1C
31.749 Ahg470420 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
35.1568 Ahg492264 fibrillarin 2
41.328 Ahg927772 zinc knuckle (CCHC-type) family protein
46.4327 Ahg940287 serine carboxypeptidase-like 35
56.7627 Ahg906774 Minichromosome maintenance (MCM2/3/5) family protein
57.2713 Ahg479780 rRNA processing protein-related
64.2651 Ahg940355 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression