Detail



ID : Ahg485874

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485874|fgenesh2_kg.5__1866__AT3G54690.1
Sequence
CTCTCAGCAC AAAGCAATCA CAAATCAAAG CTCTCAGAGA TCCAACAATG GGATCTCTTC CACCGCCATC TCTCGATTTC TCATCAATCG ATCACAGTTC CCTCAAAAAT GGCGGATCCA GCCACCAAGA GATCTCCCGT GATAATCTCC TCAACCTCTT CACATCTCAG CAAGATCTTC TCAATCACTT CTTCAAACAT CTCGATCTCT CTCAAACCCT AGATTTCTCA CGCATTCTCC TTTCCACCAC CGGCACCGTT TTCTTCACCG GCGTCGGTAA ATCCGCTTTC GTAGCTAACA AGGTTTCACA GACGCTCGTT TCTCTCAGCT TCCGTTCCTC TTTCCTCTCC CCTCTCGATG CGCTTCACGG CGACATTGGC GCTCTTTCTC CACGTGATGT TCTCGTTTTC TTCAGCAAAT CTGGCGCCAC CGAGGAGCTT CTCCGTCTTG TCCCTTGCGC TAGAGCTAAA GGAGCCTTTC TGGTGTCTCT TACCTCTGTT TCTGGGAATC CACTCGCTGG AGTTTGTGAT ATGAATGTGC ATTTGCCGCT TCTGAGAGAA TTGTGTCCGT TTAATCTCGC TCCGGTGACT TCTACGGCGA TTCAGATGGT GTTTGGTGAT ACCATCGCCG TTGCTCTCAT GGCGGCTAAA AATCTCTCCA AGGAAGAGTA TGCAGCTAAT CATCCCGCCG GCAGAATCGG CAAGAGCTTA ATCTTCAAGG TGAAAGATGT TATGAAAAAG CAAGAAGAGC TTCCTGTGTG CAAAGAAGGA GACTTGATAA TGGATCAATT AGTGGAGCTA ACCAGCAAAG GATGTGGTTG TTTGCTTGTG GTTGATGAAC ATTACCGCTT GATCGGTACA TTCACAGATG GAGATCTTCG TCGGACTCTC AAGGCTAGTG GAGAAGCAAT CTTCAAACTC AGTGTTGGAG AAATGTGCAA CAGGAAGCCG AGGACAATTG GACCGGAAAC AATGGCTGTT GAAGCTATGA AGAAAATGGA ATCACCGCCA TCACCTGTAC AGTTTCTACC GGTGGTCAAT GAAGACAACA CCTTGATTGG AATTGTAACA TTGCATGGTT TAGTTTCAGC TGGTCTCTAA ACACAAAGGT GCCTCTATAT CGAGTTTTAT ATAGTTGATT CTTTTACAGA AACCCATATC AAGAATATTG GTGTAATTTG ATTGAAATTC ACAGCCAGTG AATTGTATTG TGTCTAGTAG TACTTCATGT ATTGTCCATC GTTTACTCAA AGATATGTAT AGAGTATAAG AAGATTTCTT GTATCTTTGT TCTGCCTTAC TTTCATTTTC TTCTACTCTT GCTTTCATTT TTGCCTTAAA 
Length1340
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16172703.. 16174252
Download Sequence
A.thaliana
AGI-codeAT3G54690.1
DescriptionSugar isomerase (SIS) family protein
TAIR curator summary
Alias[SETH3]
Gene coexpression
MR
MR Locus Description
10.5357 Ahg486518 Phosphoglycerate mutase family protein
15.748 Ahg895963 NAD(P)-binding Rossmann-fold superfamily protein
22.2036 Ahg473518 RNA-binding (RRM/RBD/RNP motifs) family protein
22.4499 Ahg940175 BCL-2-associated athanogene 3
28.4956 Ahg479026 Peptidase S24/S26A/S26B/S26C family protein
33.6452 Ahg312456 C2H2-like zinc finger protein
34.3511 Ahg495704 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1
42.7083 Ahg494036 Vesicle transport v-SNARE family protein
45.9347 Ahg931262 Leucine-rich repeat (LRR) family protein
50.3786 Ahg485970 O-Glycosyl hydrolases family 17 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression