| Annotation |
|---|
| Description | jgi|Araly1|485917|fgenesh2_kg.5__1909__AT3G54980.1 |
| Sequence |
TTTTCTCTGC TGAAGATAGT TGAGAGAACC CAAAAAGATG AGATCTTTAT TGGGTTTTAG AAAAATCCCT TCGGGGCTTC GCCTTCGTTG CTTGAGAAAC AATAAACCCT TTTGTTCACA GTCTCGATTT CCTCAAGAAT CTGAGAATCC AAGTCAAGAG CAGAGACTAG TTTGCGGATC CACTTCTGAA GAAAACCCAG TTACCTCCAA AGTGAGTCTT TTGGCTGCTA AGCCTGAACA GAAGGACGAT GCATCTGTAA TCGACGTTCT TCTCAATCGC AGGAACAACC CAGAAGCTGC TCTTCGTTTC TATAATTGGG CTAGACCATG GCGTGGAAGT TTTGAAGATG GTGACGTCTT CTGGGTACTC ATTCATATTC TGGTTACTTC TCCTGAGACC TATGGACGCG CAAGCGATTT GCTCATACGG TACGTTTCTA CGAGCAATCC AACTCCAATG GCAAGTGTTT TGGTCAGTAA TTTGGTGGAT TCGGCGAAGT TGTTTGGGTT TGAAGTCAAT TCACGAGCTT TTAATTACTT GTTGAATGCT TATTCCAAAG ATAGGCAAAC GGATTGTGCG GTGGATATCG TCAATCAGAT GTTGGAACTA GGTGTGATTC CATTTGTTCC ATATGTGAAT AGGACCTTGA GTGCTTTAGT TCAAAGGAAT TCGTTAACTG AAGCTAAGGA ACTCTACAGT AGGATGGTTG CCATTGGTGT TGATGGTGAT AATGGCACAA CGCAATTGTT AATGCGAGCT AGTTTGAGAG AAGAGAAGCC TGCGGAGGCT TTGGAGGTTT TTAGTAGAGC TATTGAGAGA GGAGCAGAAC CGGATAGTTT ACTGTATAGT CTTGCTGTTC AGGCTTGTTG CAAGACGCTC AATTTGGCTA TGGCTAATAG TTTATTGAGA GAGATGAAGG AGAAGAAGTT GTGTGTCCCG TCGCAGGAAA CGTATACTTC TGTGATTTTG GCTTCCGTGA AGCAAGGTAA CATGGAGGAT GCAATTAGAT TGAAGGATGA GATGGTGAGT GATGGGATAT CGATGAATGT AGTTGCTGCG ACAAGTCTGA TCACGGGACA CTGCAAGAAC AATGACTTGG GTAGTGCTTT GGATTTGTTT TATAAGATGG AAAAGGAAGG CCCCTCTCCA AACAGCGTTA CTTTTTCGGT TCTGATAGAA CGGTTTAGTA AGAACGGGGA AATGGAAAAG GCGCTTGAAT TCTACAAGAA AATGGAAAGT TTAGGTCTTA CTCCTTCTGT CTTTCATGTC CACACGATAA TCCAAGGGTG GTTGAAAGGT CAGAAACATG AAGAGGCACT GAAACTCTTT GACGAGTCTT TTGAAACCGG TCTTGCAAAC GTGTTCATTT GTAACACTAT ATTATCCTGG TTATGCAAGC AAGGTAAGAT AGACGAAGCT ACGGAGTTAT TAAGGAAGAT GGAAAGTAGA GGTATTGGAC CGAATGTTGT TTCTTACAAT AATGTGATGC TTGCCCATTG CAGAAAGAAA AACATGGACT TGGCTCGTAC TGTTTTTTCA AATATGCTGG AAAAGGGTCT AAAGCCGAAT AACTACACGT ATTCCATTCT GATTGATGGA TGTTTCAAGA ATCATGATGA ACAAAACGTT TTGGAAGTCG TCAATCAAAT GACTTCTTCC AATATTGAAG TCAACGGGGT TGTATACCAA ACAATTATCA ATGGTTTATG CAAAGTTGGT CAGACATCCA AAGCAAGAGA ACTGTTGGCA AATATGATCG AAGAAAAACG GTTTTGTGTT AGTTGCATGA GTTACAATAG CATTATAGAT GGATTTATCA AAGAAGGTGA AATGGATTAT GCGGTTGCAG CATACGAAGA GATGTGTGCC AATGGTATTT CTCCAAACGT CATAACTTAT ACCAGCTTGA TGGATGGGTT ATGCAAAAAT AACAGAATGG ATCAAGCATT GGAAATGAGA GACGAAATGA AGAACAAAGG TGTCAAACTC GATATTCCAG CTTATGGTGC TCTTATCCAT GGGTTCTGCA AAAAGAGTAA CATGGAAAGC GCATCTGCTC TGTTCTCTGA ACTCCTTGAA GAAGGATTGA ATCCAAGCCA ACCTGTGTAC AACAGCTTGA TTTCTGGATT TCGTAATTTG GGAAACATGG TAGCAGCCCT TGATTTGTAC AAAAAAATGT TGAAAGACGG TCTACGATGT GATCTGGGTA CATATACAAC ACTGATTGAT GGATTGTTGA AAGAAGGAAA TTTGATCCTG GCCTCTGATT TGTACACAGA AATGCAGGCA GTGGGTCTTG TCCCTGATGA AATCATGTAC ACAGTAATTG TAAACGGTCT TAGCAAGAAG GGACAGTTTG TAAAAGTGGT TAAGATGTTT GAGGAGATGA AGAAGAATAA TGTGACTCCA AATGTTCTTA TCTACAACGC GGTGATCGCA GGACATTATA GAGAAGGAAA TCTCGATGAG GCTTTTAGAC TTCACGATGA GATGCTTGAC AAGGGTATTC TACCTGATGG TGCTACATTT GATATTCTAG TTAGTGGGAA AGTCGGAAAA TTTCAACCTA TACGTGCAGC AAGTTTGTAG TCTGGCAAAA CCGGGCCACG TTATTGACTG GTTACTTAGC TTTGGCTTTC CGTGTGACCC GATAATCTGA CTGCTTAAGG TGTGCACTTT TCAATTTGCA CGGTTTTAGT ATGGATGTTT TTATTCATGA AAGAGGGAGA CTTTATAGAC TTTCTGTAAA GAAACTAAGA ACTGCCTTCT GTTTTTGTCA ATTTTATAAA ACA |
| Length | 2793 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16306607.. 16309399 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54980.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.3589 |
Ahg480540 | RING/FYVE/PHD zinc finger superfamily protein |
| 12.0416 |
Ahg479316 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 15.4919 |
Ahg483751 | transmembrane protein-related |
| 16.0624 |
Ahg339800 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 24.7386 |
Ahg472398 | wound-responsive family protein |
| 30.6594 |
Ahg933142 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 31.9844 |
Ahg923311 | |
| 34.6121 |
Ahg486246 | Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) |
| 34.9285 |
Ahg919663 | pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein |
| 37.229 |
Ahg925691 | Arginyl-tRNA synthetase, class Ic |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|