| Annotation |
|---|
| Description | jgi|Araly1|485946|fgenesh2_kg.5__1938__AT3G55260.1 |
| Sequence |
GAACAATCCT CCGTTGACCA AACACTCTTT TCGAAAATGT CACCGAATCT TCTTCGTCTT CTTTTCCTAT TGATGATATT CATCTCTTTA TCTATCACTT CATCTCTGTC AACTCCGTCG CCGGCTGATT CTCCTCCTTA TCTATGGCCG TTGCCGGCAG AGTTTTCGTT CGGAAACGAG ACACTCTCGG TGGATCCGGC CTTGACTCTA ATCATAGCTG GAAATGGCGG TGGATCTCCG ATTGTTAGAG CTGCGTTTGA TAGGTATATG GGTATAATCT TTAAACACGC TTCTGGTAGA GGTTCTCTAT TGGCGAGAAT TAGATTTCTG AGAATGGTTG AGTATGATAT CACTTCTTTG AAGATCGTTG TTCACTCTGA TTCTGAGGAG CTTCAATTGG GTGTGGATGA GAGTTATACA TTGATGGTTT CGAAGAAGAA CGAGCAATCG ATTGTTGGAG CTGCCACGAT CGAGGCTAAT ACAGTCTATG GTGCACTTAG AGGATTGGAG ACATTTAGCC AATTGTGTGC CTTTGATTAT CTAACCAAAT CTGTGCAAAT ATATAAAGCA CCCTGGTATA TTCAAGATAA ACCTAGATTC GGATACCGCG GTCTGCTAAT AGATACATCA AGACATTTTT TACCAATTGA TGTTATTAAG CAAATAATCG AATCCATGTC CTTCGCCAAA CTTAATGTCC TGCATTGGCA CATTGTAGAC GAGCAATCAT TTCCTTTTGA AACTCCTACA TATCCTAATT TGTGGAAAGG AGCTTATTCG AGATGGGAAC GTTACACAGT TGAAGATGCC TCTGAGATTG TCAGGTTTGC CAAAATGAGA GGTATTAATG TCATGGCTGA AGTAGATGTC CCTGGCCATG CGGAATCGTG GGGAACTGGA TACCCTGATC TTTGGCCGTC TCTGTCTTGC CGAGAGCCCC TTGATGTTAC TAAAAATTTT ACATTCGATG TGATTTCTGG CATTTTGGCA GATATGAGAA AGATATTTCC ATTTGAGCTT TTCCACTTGG GTGGTGATGA AGTTAATACA GATTGCTGGA AAAACACAAC TCATGTTAAA GAATGGCTTC AGGGTCGCAA CTTCACTACT AAGGACGCAT ATAAATACTT TGTACTCCGA GCGCAACAGA TAGCTATATC GAAAAATTGG ACACCTGTCA ACTGGGAAGA AACCTTCAGT TCCTTTGGAA AAGATCTTGA TCCGGGGACT GTGATTCAAA ACTGGCTAGT GTCTGATATA TGTCAAAAAG CGGTAGCAAA AGGATTCAGG TGCATTTTCA GTAACCAAGG ATATTGGTAT CTCGACCATC TAGATGTGCC GTGGGACGAG GTTTATAACA CCGAGCCTCT AAATGGAATC GAGGATCCTT CTCTCCAAAA GCTGGTTATC GGAGGAGAAG TTTGCATGTG GGGTGAAACA GCTGATACAT CCGTTGTCCT TCAGACCATT TGGCCGCGTG CTGCAGCAGC TGCAGAACGG ATGTGGAGCA CCAGAGAGGC CGTGTCAAAG GGGAACATAA CGTTAACTGC ATTGCCACGT CTACACTATT TCAGATGTCT ACTGAATAAC CGCGGAGTTC CAGCAGCTCC AGTCGATAAC TTTTACGCAA GAAGACCGCC ATCGGGACCT GGTTCTTGCT ATGCTCAGTG ATCCAAAACA TTTCTTCTCA TTGTACTATA TGTAATGTAC GTGTCTCATC TGAAATCTGG TTGTTGCATT TTCTATTCTA AATTGTGCTT CTCAATTACT CAAATCAAAT TTGGCTTACG GTTTTTTCCC TTAAACACAC GTCGCTCTTA CCAC |
| Length | 1824 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16434821.. 16438931 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G55260.1 |
| Description | beta-hexosaminidase 1 |
| TAIR curator summary | Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products. |
| Alias | [ATHEX2][HEXO1][beta-hexosaminidase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg477938 | dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative |
| 7.87401 |
Ahg496800 | indole-3-acetic acid inducible 9 |
| 12.0416 |
Ahg479408 | RING/U-box superfamily protein |
| 13.9642 |
Ahg328341 | 3-methylcrotonyl-CoA carboxylase |
| 17.8885 |
Ahg473698 | |
| 19.4422 |
Ahg489836 | Sec1/munc18-like (SM) proteins superfamily |
| 20.8327 |
Ahg484400 | O-fucosyltransferase family protein |
| 24.6577 |
Ahg480197 | NagB/RpiA/CoA transferase-like superfamily protein |
| 28.931 |
Ahg941621 | Zn-dependent exopeptidases superfamily protein |
| 33.1361 |
Ahg496212 | PDI-like 1-4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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