Detail



ID : Ahg485946

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485946|fgenesh2_kg.5__1938__AT3G55260.1
Sequence
GAACAATCCT CCGTTGACCA AACACTCTTT TCGAAAATGT CACCGAATCT TCTTCGTCTT CTTTTCCTAT TGATGATATT CATCTCTTTA TCTATCACTT CATCTCTGTC AACTCCGTCG CCGGCTGATT CTCCTCCTTA TCTATGGCCG TTGCCGGCAG AGTTTTCGTT CGGAAACGAG ACACTCTCGG TGGATCCGGC CTTGACTCTA ATCATAGCTG GAAATGGCGG TGGATCTCCG ATTGTTAGAG CTGCGTTTGA TAGGTATATG GGTATAATCT TTAAACACGC TTCTGGTAGA GGTTCTCTAT TGGCGAGAAT TAGATTTCTG AGAATGGTTG AGTATGATAT CACTTCTTTG AAGATCGTTG TTCACTCTGA TTCTGAGGAG CTTCAATTGG GTGTGGATGA GAGTTATACA TTGATGGTTT CGAAGAAGAA CGAGCAATCG ATTGTTGGAG CTGCCACGAT CGAGGCTAAT ACAGTCTATG GTGCACTTAG AGGATTGGAG ACATTTAGCC AATTGTGTGC CTTTGATTAT CTAACCAAAT CTGTGCAAAT ATATAAAGCA CCCTGGTATA TTCAAGATAA ACCTAGATTC GGATACCGCG GTCTGCTAAT AGATACATCA AGACATTTTT TACCAATTGA TGTTATTAAG CAAATAATCG AATCCATGTC CTTCGCCAAA CTTAATGTCC TGCATTGGCA CATTGTAGAC GAGCAATCAT TTCCTTTTGA AACTCCTACA TATCCTAATT TGTGGAAAGG AGCTTATTCG AGATGGGAAC GTTACACAGT TGAAGATGCC TCTGAGATTG TCAGGTTTGC CAAAATGAGA GGTATTAATG TCATGGCTGA AGTAGATGTC CCTGGCCATG CGGAATCGTG GGGAACTGGA TACCCTGATC TTTGGCCGTC TCTGTCTTGC CGAGAGCCCC TTGATGTTAC TAAAAATTTT ACATTCGATG TGATTTCTGG CATTTTGGCA GATATGAGAA AGATATTTCC ATTTGAGCTT TTCCACTTGG GTGGTGATGA AGTTAATACA GATTGCTGGA AAAACACAAC TCATGTTAAA GAATGGCTTC AGGGTCGCAA CTTCACTACT AAGGACGCAT ATAAATACTT TGTACTCCGA GCGCAACAGA TAGCTATATC GAAAAATTGG ACACCTGTCA ACTGGGAAGA AACCTTCAGT TCCTTTGGAA AAGATCTTGA TCCGGGGACT GTGATTCAAA ACTGGCTAGT GTCTGATATA TGTCAAAAAG CGGTAGCAAA AGGATTCAGG TGCATTTTCA GTAACCAAGG ATATTGGTAT CTCGACCATC TAGATGTGCC GTGGGACGAG GTTTATAACA CCGAGCCTCT AAATGGAATC GAGGATCCTT CTCTCCAAAA GCTGGTTATC GGAGGAGAAG TTTGCATGTG GGGTGAAACA GCTGATACAT CCGTTGTCCT TCAGACCATT TGGCCGCGTG CTGCAGCAGC TGCAGAACGG ATGTGGAGCA CCAGAGAGGC CGTGTCAAAG GGGAACATAA CGTTAACTGC ATTGCCACGT CTACACTATT TCAGATGTCT ACTGAATAAC CGCGGAGTTC CAGCAGCTCC AGTCGATAAC TTTTACGCAA GAAGACCGCC ATCGGGACCT GGTTCTTGCT ATGCTCAGTG ATCCAAAACA TTTCTTCTCA TTGTACTATA TGTAATGTAC GTGTCTCATC TGAAATCTGG TTGTTGCATT TTCTATTCTA AATTGTGCTT CTCAATTACT CAAATCAAAT TTGGCTTACG GTTTTTTCCC TTAAACACAC GTCGCTCTTA CCAC 
Length1824
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16434821.. 16438931
Download Sequence
A.thaliana
AGI-codeAT3G55260.1
Descriptionbeta-hexosaminidase 1
TAIR curator summaryEncodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.
Alias[ATHEX2][HEXO1][beta-hexosaminidase 1]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg477938 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative
7.87401 Ahg496800 indole-3-acetic acid inducible 9
12.0416 Ahg479408 RING/U-box superfamily protein
13.9642 Ahg328341 3-methylcrotonyl-CoA carboxylase
17.8885 Ahg473698
19.4422 Ahg489836 Sec1/munc18-like (SM) proteins superfamily
20.8327 Ahg484400 O-fucosyltransferase family protein
24.6577 Ahg480197 NagB/RpiA/CoA transferase-like superfamily protein
28.931 Ahg941621 Zn-dependent exopeptidases superfamily protein
33.1361 Ahg496212 PDI-like 1-4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression