Detail



ID : Ahg485977

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485977|fgenesh2_kg.5__1969__AT3G55510.1
Sequence
TCTCAAATTC CTCTGTGCTT TCGATTCTTA CCGGTAAATT TTTCTTATTT TACTTCTCTT ATGCTCGTAT TTAGAGGAAT TGAGCAAAAC CCTAGTTGTT TAATTGTCAA ATTTGTAGAT TGAGAATCTG AATTTATCGA CCTAGTTATT GAATCTTTGT TTCCTCGAGT TGATACCTAG AAACCCTTTT GCAGTCGCAG TCGCAGTAAA ATGGGTAAGT TGGGGAAGAA AGCTAGGAAA TTTGCCAAGA AAAATCTCCA GTCTGTTGAG AAACGAAACA GAAAGCTGAA GCCTTTTTTC AAGAAGAAAT TTGCAAAGAG AAATGAGCGT CACCAAGTGG GAGATGAAGA GAAGAAGAAG GTAGAGCAAC AGCCTAAGAA GAGATGTCAA GAAGAAGAAT TTCAGGATAT ATCAATAGAT GCAGTATTCG GCAAGGATGA TGATGAATTT CTCCGCGATT GTGATTCAGA TAGTGATGGA TATCTGGATG AGTTGGTAGA TGAAGCTGAC TCAGATATAA TGAAGCACAA AGTACTCTCA GGATCTGTTT TAAGCACTTG CTGTGACCGA GTTGATGAGA AGCAGTCTGT CCAGGCATTA ATAAGTTTGT TAAATTGGTA TCGAGCTGCA TGTCATTATG GGCACGAACC ATCAGGAATT CCGAGGCCTG ATATATACTA TGACATAGAA GACAGTGAGA CATTTGCTAA GGTCATGATT TTTATGCTCC AAAAAGCTGA TCACACTTTC AGGAGTATCC TGGGATTATC AGACTCCAGT ACTAAGGAGA AGATTTTGAA GTTGAAGAAC AACCCAAAAT GGGATAGTTT AAAACCACTG GTCAAATCTT TTGTTCGAAG TACTTTGCAT CTTGTTAAGC AGGCAGCAGA TTTGGAGATA ATAGTTTTTG CTCTTACCCA ACTTAGAGTT TCTATCGTGT TTCTTGCCGC ATTTCCAGAT CTTCTGAAAA AATTGATCAA GATATCTGTT CATCTGTGGG TAACCGGTGA AGAGACGCTA TCGCAGCAGG CTTTTCTAAT CTTGAAAGAC ATCAGTATGG TTTTTAACAC AGAATGCTTT GATACCTGCT TAATCAGCAT GTACAAAGCC TTTCTACATG ACTGTGATAT TCCAAAGGCA AATTCAGAAC AACGTTTGCC GTTCCTCAGA GATTCCCTTG TTGAGCTATG CTCCCAAGAT ATGCAGAAGT CTTATACCAA GGCCTCTGTT TCTATTACAC AACTTGCCAA GTTATTGAAA ATGGCTCTCA CTACAAAGAA TAAGGAAGCC GTCGAGAAGA TACATAGCGG GCAGTACACA AATTGTGTTG ATCTCTGGGT AAATTTTATT GCTGCCAACG TTCAGGATTG TGATATCCAG CCTCTGCTTT ATACTATAGT TCAGGTTATA AATGGAGTTG CTCAACTAAT TATTGGACCA CGTTACCTGC TCCTAAGGGT TAAATGTATC CAATGGCTCA ATCATCTCTC TCGTACAAGC GGTATATTCA TTCCCATTGC ATCGTTGGTA TTGGATATGT TGGAATATAA AACCGCAAAG GATGGTGAAA AGCAAGAACA GAAGCTTGAA GCTGTCTCAA CCGTAAAGCT TCCTAAGAAT TGGTTAAAGT CCCAAAATTT CCAAGAACAG TGTGTCTTTT CTGTGATTGA ACTGCTTGCT GTCCACTTTG CTCAATGGAG CTTCCACATA TCATTTCCAG ATCTTGCTAC TATTCCCGTC ATGAGGCTGA AGAAATTTCA CGAGAGAAGC ACTATGGAAG GGTTGAAGCG GGTGGTGAAA CGCTTTATAG AGCAGGTAGA GTCGAACATT GAGTTTGTTC AAAGGAAGAG AGATGACGTG ACTTTTTCTC CAAACGATCA ACAATCCGCA GACACGTTTA TGCAGCTTGA AAAGCAAAAT ACGAATGCTC CTTATACACA ATACTATCAT AGCATCATAG ACAAAGCTCT TGGAACAAAG AAGAAGAAGA AGAAGAGAGG CAAGTGTGGG AACTAATATA TTTCCCTTGG AACTTGCCTA ATTTTGTTCA CCATTTTTGT TGTTTGGCTT TCATGAATTA TTTTCGAAAA GATCGAATAC ATTTATGCAA AACTTTAGTG TAAT 
Length2124
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16555098.. 16558744
Download Sequence
A.thaliana
AGI-codeAT3G55510.1
DescriptionNoc2p family
TAIR curator summary
Alias[RBL][REBELOTE]
Gene coexpression
MR
MR Locus Description
13.1909 Ahg477959 ARM repeat superfamily protein
14.2829 Ahg492264 fibrillarin 2
27.4591 Ahg488419 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
28.1069 Ahg480727 Noc2p family
29.1719 Ahg314644
30.5941 Ahg482805 ribosome biogenesis regulatory protein (RRS1) family protein
38.7814 Ahg479744 putative mitochondrial RNA helicase 1
40.1373 Ahg476958 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
41.497 Ahg329936 RNA binding
45.7165 Ahg318005 protein arginine methyltransferase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression