| Annotation |
|---|
| Description | jgi|Araly1|486056|fgenesh2_kg.5__2048__AT3G56150.1 |
| Sequence |
AAGATGACGT CTCGTTTTTT CGCTCAGGGT GGAAGTGAAA GTGAAGATGA GAGTGATTAT GAAGAAGAGG TTAATGAGGT TCAGAATGAC GACGTCACTA ACCGTTACCT TCAAAGTGGT AGTGAGGATG ACTTGGATAT CGATACCAAA CGTGTGGTTA AGCCTGCCAA AGATAAACGT TTTGAGGAGA TGACCTACAC TGTTGAGCAG ATGAAGAATG CTATGAAGAT TAATGATTGG GTTAGCCTTC AAGAAAACTT TGATAAGGTT AACAAACAGC TTGAGAAGGT TATGAGGATT ACTGAGGCTG TCAAGCCTCC TACCTTGTAT ATCAAGACTC TTGTTATGTT GGAGGATTTC TTGATTGAAG CCCTTGCGAA TAAGGAAGCC AAGAAGAAGA TGAGCACTAG TAACTCCAAG GCTTTGAACT CTATGAAACA GAAACTGAAG AAGAACAATA AGCTGTACGA AGATGATATC AACAAATATC GTGAGTCTCC AGAAGTTGAG GAAGAGAAAC AACCTGAAGA TGACGACGAT GAAAGTGATG ACGATGATGA GTCTGAAGAT GATGTGGAGG AACCTACTGA TAATCTCTCT TGGGAGAAGA TGCTGAGCAA AAAAGATAAG CTTATGGAGA AGCTGATTAA TAAAGATCCC AAAGAGATCA CCTGGGACTG GGTCAACAAG AAGTTCAAGG AAATTGTGGC TTCTCGTGGG AAAAAGGGCA CTGCTCGATT TGAGCTAGTT GATCAGCTTA CGCACTTGAC AAAGATTGCC AAGACTCCTG CGCAGAAGCT TGAAATCTTG TTTAGCGTTA TTTCGGCTCA GTTTGATGTG AATCCAGGTC TCAGCGGGCA CATGCCTATC AATGTCTGGA AGAAATGCGT GCTTAACATG CTCACCATAC TGGACATTCT CGTCAAGTAC AATAACATTG TTGTGGATGA CACAGTTGAA CCTGATGAGA ATGAAACTTC AAAGCCAGCA GATTATGATG GAAAAATCCG GGTCTGGGGA AATTTGGTTG CATTCTTGGA GAGGATTGAC ACTGAGTTTT TCAAGAGTTT GCAATGCATT GATCCTCACA CCCGTGAGTA TGTTGAGAGA CTGAGGGATG AGCCCATGTT CTTGGCCCTT GCTCAGAACA TCCAGGACTA CTTCGAGCGG ATGGGTGATT TTAAAGCTGC TGCAAAGGTA GCCTTAAGAC GAGTTGAGGC AATATATTAC AAGCCCCAGG AAGTTTATGA TGCTATGAGG AAATTGGCTG AGTTGGTGGA AGAAGAAGAA GAAGAAGAAG AAACTGAGGA GGCCAAAGTG GAGAGTGGAC CTCCTACATC ATTCATTGTT GTTCCGGAGG TTGTTCCCCG AAAGCCTACC TTCCCAGAGA GCAGCCGAGC AATGATGGAT ATTCTTGTGT CCCTTATCTA CAGAAATGGA GATGAGCGAA CCAAAGCTCG TGCGATGCTA TGTGATATCA ATCACCATGC TTTAATGGAC AACTTTGGGA CTGCTAGAGA CCTGTTGCTG ATGAGTCATC TGCAAGACAA CATCCAGCAC ATGGACATCT CAACACAGAT TCTCTTTAAC AGGACCATGG CGCAGCTTGG TCTTTGCGCC TTCCGGGTTG GAATGATCAC TGAGTCCCAT AGCTGCCTTT CCGAGCTGTA TTCTGGTCAA AGGGTGAGGG AGTTGCTTGC CCAAGGTGTT TCGCAAAGCC GATACCATGA GAAGACCCCA GAGCAGGAAA GGATGGAGAG GAGAAGACAA ATGCCGTACC ACATGCACTT AAACCTCGAG CTCCTGGAGG CAGTTCATCT CATCTGTGCC ATGCTACTTG AAGTCCCAAA CATGGCTGCA AACTCGCACG ATGCCAAACG CAGAGTGATT AGCAAGAATT TCCGCCGCCT GCTCGAGATC AGTGAAAGGC AAGCATTCGC TGCGCCGCCT GAGAATGTAC GTGACCACGT CATGGCAGCC ACCAGAGCCC TGACCAAAGG GGATTTCCAG AAGGCGTTTG AAGTTTTGAA CTCTCTTGAG GTCTGGAGGC TGCTCAAGAA CCGTGACAGC ATCCTCGATA TGGTGAAGGA TAGGATCAAA GAAGAGGCAC TAAGGACTTA CCTATTCACA TACTCAAGCT CCTATGAGTC CTTAAGTCTT GATCAGCTGG CCAAAATGTT TGACGTCTCT GAGCCGCAGG TCCACAGCAT TGTGAGCAAG ATGATGATTA ATGAGGAGCT TCATGCAAGC TGGGACCAGC CAACTCAATG CATCGTCTTC CATGAAGTGC AACACAGCAG ACTACAATCA TTGGCTTTCC AGTTAACCGA GAAACTCTCG ATTTTGGCAG AAAGCAATGA AAGGGCAATG GAATCTAGAA CCGGTGGAGG TGGTGTGGAT CTGAGCTCAA GGAGAAGGGA CAACAATCAA GACTATGCAG GAGCAGCATC AGGTGGTGGT GGATATTGGC AAGACAAGAC GAATTACGGA CAAGGAAGAC AGGGTAACAG GTCAGGGTAT GGTGGAGGAA GATCATCTGG ACAAAATGGT CAGTGGTCAG GGCAGAACCG AGGAGGAGGG TATGCAGGAA GAGTTGGTTC AGGAAACAGA GGTATGCAGA CGGATGGCTC AAGCCGTATG GTGAGTCTTA ACCGAGGTGT TCGTACTTAA AGAGGATGCA GTGTTGACCT TAGGCTCAAC CTTTTGTTAT GTTTTGAATT CCTTTTTGTT ATCAAATGGT TCTTTCTAAG AGATGTTCAT CACATTTTCT CGCATTGTGA TTGCTTCTTT TCTTTGTGAT ATTGGCAGTT GTTGGAAAAA ACTTTTAAGA ATGCTTTATT GAAAAGTTTA ATAAGTTTTT GTTT |
| Length | 2864 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16837562.. 16840787 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G56150.1 |
| Description | eukaryotic translation initiation factor 3C |
| TAIR curator summary | member of eIF3c - eukaryotic initiation factor 3c |
| Alias | [ATEIF3C-1][ATTIF3C1][EIF3C][EIF3C-1][TIF3C1][eukaryotic translation initiation factor 3C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.3693 |
Ahg937821 | Translation protein SH3-like family protein |
| 13.2665 |
Ahg919093 | eukaryotic translation initiation factor 2 gamma subunit |
| 13.6382 |
Ahg474400 | histone H2A protein 9 |
| 18.868 |
Ahg940194 | TUDOR-SN protein 1 |
| 18.8944 |
Ahg476596 | NAP1-related protein 1 |
| 21.5407 |
Ahg922123 | GTP binding |
| 22.2486 |
Ahg492815 | small nuclear ribonucleoprotein associated protein B |
| 22.5389 |
Ahg483266 | Ribosomal protein S5 family protein |
| 23.1948 |
Ahg471307 | CYTOCHROME P450 51G1 |
| 23.3452 |
Ahg489969 | Adaptin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|