Detail



ID : Ahg486197

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486197|fgenesh2_kg.5__2189__AT3G57510.1
Sequence
TCATATTACA TAATCCCAAA TAAAGCAGCA AACATTCTCA TCTTACTCAC AAGGAAACAA CACTCATTCT TTTTTAAACC GAAATGGCCC GTTGTTGCAG ACTTCTTGCT GTTTTCTTAT GCGTTCTTTT GATGCTCTCT TTGTGTGAAG CTTTGAGTAG CAACGTTGAT GATGGATATG GTCATGAAGA TGGAAGTTTC GAATCCGATA GCTTGATCAA GCTTAACAAC GATGATGTTC TTAGCTTGAA AAGCTCCGAT GAAACCACTT TGGAATCATC AACTGTTAGT GTTTCAAACT TCGGAGCCAA AGGAGATGGA AAAACCGATG ATACTCAGGC CTTCAAGAAA GCATGGAAAA AAGCATGTTC AACAAATGGA GTTACTACTT TCTTAATACC TAAAGGGAAG ACTTATCTCC TTAAGTCTAC TAGATTTAGA GGCCCATGCA AATCACTACG TAACTTTCAG ATCCTAGGCA CTTTATCAGC ATCTACGAAA CGATCAGATT ACAAAGACAA AAACCATTGG CTTATCTTAG AGGACGTTAA CAATCTATCA ATCGATGGTG GCTCGACGGG GATTATTAAT GGCAACGGCA AAATCTGGTG GCAGAACTCA TGCAAAATCG ATAAATCTAA GCCATGCACA AAAGCGCCAA CGGCTCTTAC TTTATACAAT CTAAAGAATT TGAATGTGAA GAATCTGAGG GTAAGAAATG CGCAGCAGAT TCAGATTTCA ATTGAGAAAT GCAACAAAGT TGAAGTTAGT AATGTTGTGA TCACTGCTCC CGGCGATAGT CCCAACACCG ATGGTATCCA TATCACTAAT ACTCAAAACA TTCGAGTCTC CAACTCAGAT ATCGGAACAG GTGATGATTG TATATCCATT GAGGATGGAA CGCAAAATCT TCAAATCTTT GATTTAACTT GCGGCCCTGG TCACGGAATC AGCATTGGGA GCTTGGGGGA CGACAATTCG AAAGCTTATG TCTCGGGAAT TAATGTGGAT GGTGCAAAGT TCTCTGAGAG TGATAATGGA GTACGGATTA AGACTTATCA GGGAGGATCA GGGACTGCCA AGAACATTAA ATTTCAAAAC ATTCGAATGG AAAATGTCAA GAATCCGATC ATAATCGACC AGAACTACTG CGACAAGGAC AAATGCGAAG AACAAGGATC CGCCGTGCAA GTGAAAAACG TTGTGTACAA GAACATATCC GGTACAAGCG CGACGGATGT GGCGATAACG TTGAATTGCA GTGAGAAGTA TCCATGCCAA GGGATTGTGC TTGAGAACGT GAACATAAAA GGAGGAACAG CTTCTTGCAA AAATGCCAAT GTTAAAAATC AGGGCACCGT TTCTCCTAAA TGCTCTTAAG CTAATTATGT AATATACATA TACACGTATA AATATATAGA AATACATATA TATATATATA CACACATGTA TATTGTACTC TACGTATTGC TTCTTAATAT ATATAGTATA TGGGAAAATA GTAGAAAGAT TTGTTGTCCA CATATAAAAT TACCAACATT GATTATTAGT ATTTCCATGA ATAAATTAAT AAGATTATTT GTCT 
Length1584
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17426831.. 17429474
Download Sequence
A.thaliana
AGI-codeAT3G57510.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summaryEncodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.
Alias[ADPG1]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg336601
6.48074 Ahg348080 1-aminocyclopropane-1-carboxylate synthase 9
20.7846 Ahg479173 Pectin lyase-like superfamily protein
21.9089 Ahg897140
25.0998 Ahg484466 Plant self-incompatibility protein S1 family
28.9137 Ahg353479
32.249 Ahg937563
32.4654 Ahg915185
32.7261 Ahg946728
33.7046 Ahg924509
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression