| Annotation |
|---|
| Description | jgi|Araly1|486333|fgenesh2_kg.5__2325__AT3G58780.1 |
| Sequence |
GTTAGATGAT CTGTCCATTT TTTCTTTTTA TTTTATGTAT AAATATATTT GAGCACAAAG AAAAAACTAA TAACCTTCTG TTTTCAGCAA GTAGGGTCTT ATTACCTTCA AAGAAATATT CCTTCAAATA TATGAAACTC ATAAACCAAA ACAGAAATTA CAAAAAGAAA GAGAGATATT TTTCAAGAAC AACATAATTA GAAGAGCAGA AGCAGCAGTT AAGTGGTACT GAGATAAATA ATAATATATA GTTTCTCTTC AAAGTTTCTC ATCACCCACC TTCTCCTTTT TTGCTGATCT ATCATAATCT TGAGAACTCA GGATCAATGG AGGAAGGTGG GAGTAGTCAC GACGGAGAGA GTAGCAAGAA GATAGGGAGA GGGAAAATAG AGATAAAGAG GATAGAGAAC ACAACAAATC GTCAAGTAAC TTTCTGCAAA CGACGCAATG GTCTTCTCAA GAAAGCTTAT GAACTCTCAG TCTTGTGTGA TGCGGAAGTT GCCCTCGTCA TCTTCTCCAC TCGTGGCCGT CTCTATGAGT ACGCCAACAA CAGTGTGAGG GGAACAATTG AAAGGTACAA GAAAGCTTGT TCCGATGCCG TCAACCCTCC TTCCGTCACC GAAGCTAATA CTCAGTACTA TCAGCAAGAA GCCTCTAAGC TTCGGAGGCA GATTCGAGAT ATTCAGAATT CAAACAGGCA TATTGTTGGG GAATCACTTG GTTCCTTGAA CTTAAAGGAG CTCAAAAACC TCGAAGGACG GCTTGAAAAA GGAATCAGCC GTGTCCGATC CAAAAAGAAC GAGCTGTTAG TGGCAGAGAT AGAGTATATG CAGAAGAGGG AAATGGAGTT GCAACACAAT AACATGTACC TGCGAGCTAA GATAGCCGAA GGTGCCAGAT TGAATCCGGA ACAGCAGGAA TCGAGTGTGA TACAAGGGAC GACTGTTTAC GAATCCGGTG TATCTTCTCA TGACCAGTCG CAGCATCATA ATCGGAACTA TATTCCGGTG AACCTTCTTG AACCGAATCA GCAATTCTCC GGCCAAGACC AACCTCCTCT TCAGCTTGTG TAACTCAAAA CATGAAAACT TGTTTCTTCC CCTCAAAACT ATTAAGAGAG ATTCATTTTA TATTTATAAT GCGACTTCTT AAATTCATAG TTTAGGTTCA AATAATGATA AT |
| Length | 1182 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 17981619.. 17985763 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G58780.3 |
| Description | K-box region and MADS-box transcription factor family protein |
| TAIR curator summary | One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells. |
| Alias | [AGL1][SHP1][AGAMOUS-like 1][SHATTERPROOF 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.78233 |
Ahg925390 | |
| 7.93725 |
Ahg922446 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| 26.0384 |
Ahg484953 | Major facilitator superfamily protein |
| 46.9042 |
Ahg913338 | Eukaryotic aspartyl protease family protein |
| 48.8365 |
Ahg355459 | |
| 57.1664 |
Ahg338146 | KNOX/ELK homeobox transcription factor |
| 57.3411 |
Ahg490879 | cytochrome P450, family 81, subfamily F, polypeptide 4 |
| 76.6812 |
Ahg932542 | RNI-like superfamily protein |
| 77.4597 |
Ahg929611 | |
| 78.3582 |
Ahg897983 | Protein of unknown function (DUF59) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|