Detail



ID : Ahg486363

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486363|fgenesh2_kg.5__2355__AT3G59020.2
Sequence
GACCTTCTTC TCTTATACCT CTCTCTCTTT CGTCTTCGTC GTCTCTTCTT CCTCTTGATT TGACTCTCGT CTCGTCGATT TCCTCCGGGA GGAGACTCGA AATTCGTGAC TTGCCGATTG TGAATTTCCC GATGGATCTG CCTAGCCTTG CCTTAATCGT TGGCGCGGCT GCTTTCAGTC CCAATCCCGA TGAGCGTAGA GCTGCTGAGC AGAGCCTTAA TCAGTTGCAG CACACTCCAC AGCATTTGAT AAGGATACTG CAAATAATTG TTGATGGTGG CTCTGATCTT TCTGTACGCC AATCTGCTAG TATCCATTTC AAGAATTTCA TTGCTAAGCA CTGGGAACCT CATTCTGGTG ATCAGAACAA AATCTTGCCT AGTGATAAGA ATGTTGTCAG GGACCAGATT CTTGTATATG TCTCTCAAGT TCCTCCGATT TTGAGAGTTC AGATGGGAGA GTGCCTGAAG ACCATAATTT ACGCTGACTA TCCTGAGCAA TGGCCCCATC TCCTCGACTG GGTGAAGCAC AACTTGCAAG AACAAGAAGT TTATGGAGCG CTATTTGTCT TGAGGATACT ATCTTCAAAA TACGAGTTTA AGTCAGATGA AGATAGGGCA CCCATTCACC GAGTAGTCGA GGAGACGTTT CCGCACCTTT TGAATATATT TAACAAACTT GTCCATGTTG AAAATCCTTC TCTCGAAGTG GCAGACCATA TCAAGCTTAT TTGCAAGATA TTCTGGTCAT GTATTTATCT AGAGCTTCCG AGACCATTGT TTGATCCAAA CTTTTTTAAT GCTTGGATGG GTCTGTTCCT AAACATTTTG GAACGTCCTG TTCCCGTAGA AGGTCAGCCT GAAGACCTTG AGCTTAGAAA ATCCTGGGGA TGGTGGAAGG CCAAGAAGTG GGTTGCTCAT ATCTTAAACA GGCTATACAC TCGGTTTGGA GATCTGAAAC TCCAGAATCC AGATAACAAA GCCTTCGCCC AAATGTTCCA GATGAACTAC GCAGCCAAGA TATTAGAGTG CCACCTGAAA TTATTGAATG CCATTCATAT TGGTGGATAT CTTCCGGATA GAGTCATCAA TCTAATTCTT CAATATCTAA GCAACAGTAT CTCGAAGAAT AGCATGTACA ACTTACTGCA GCCCCACCTT GACACTCTAT TATTTGAAAT AGTTTTCCCA CTAATGTGTT TCAATGACAA TGATCAAATG CTTTGGGATG AAGACCCACA TGAGTATGTA AGGAAGGGTT ATGATATAAT TGAAGATTTA TACAGTCCCA GGACTGCGTC TATGGACTTT GTGACTGAGC TGGTCAGAAA GCGTGGAAAA GACAACTTCC CAAAATTTAT ACAGTTCATC GTGGACATTT TTAAGAGATA TACTGAAGCA CCTCTGGAAG ATAAGCCTTA TCGCCTTAAG GATGGTGCTC TGCTTGCTGT TGGGACACTT TGTGATAAAC TTAGGCAAAA TGAACCCTAC AAATCTGAAC TGGAGAATAT GTTAGTGCAA CATGTTTTTC CTGAATTTAG CAGCCCGGCT GGTCATCTTA GAGCTAAGGC TGCATGGGTT GCAGGGCAGT ACGCCCATAT CAATTTCTCA GACCAGAGCA ATTTTTCAAA GGCATTGCAT TGTGTTATCT CCGGAATGCG TGATCCAGAA CTTCCTGTTC GGGTGGATTC AGTTTTTGCT TTGCGTTCCT TTATTGAAGC CTGCAAAAAT TTAGATGAAA TCCGCCCAGT TCTTCCCCAA CTTCTTGATG AATTTTTCAA GCTAATGAAT GAAGTTGAAA ACGAAGACCT TGCTTTTACT TTAGAGACTA TCGTGTATAA GTTTGGAGAG GAGATTTCTC CTTATGCTTT GGGTTTGTGC CAAAACTTGG CCAGTGCATT CTGGAGGTGT ATCGACACTG ACAATGGTGA TGATGAAGCT GATGATGCTG GTGCATTGGC TGCAGTGGGA TGTCTCCGTG CCATTAGTAC CATTCTTGAA TCTATCAGTA GTCTCCCTCA TCTTTATGGT CAGATTGAAC CACAGTTGCT GCCAATAATG CGGAAAATGC TGACAACTGA TGGTCAAGAT GTGTTTGAAG AGGTTCTGGA GATCGTCTCA TATATTACTA CTTTTTCACC TACAATATCA TTGGACATGT GGAGTCTATG GCCTTTAATG ATGGAAGCAC TCGTGGATTG GGCTATTGAC TTTTTCCCAA ATATATTGGT CCCGCTGCAC AACTATATAT CCAGGGGGAC TGGGCATTAT CTCACTTGCA AGGAACCAGA TTACCAGCAA AATCTTTGGA ATGTGATCTC TGTGCTTATG GCAAATAAAA ATATTGATGA CAGTGACCTT GAGCCAGCTC CGAAGCTATT AGGGATAGTG CTTCAGACAT GCAAGGGCCA GGTGGATCAA TGGGTAGAGC CCTACCTGAG AATCACACTT GATCGGCTAC GCGGTGCTGA GAAATCTTCC TTCAAGTGCC TTCTGGTTGA AGTGGTTGCA AATGCCTTTT ACTACAATGC CCCTTTGGCA CTTGGCATAC TGCAACGATT TGGTATCGCA ACAGAAATTT TTACTCTATG GTTCCAAATG CTGCAAGAAA AGAAGAAGAG TGGCGCACGT TCTAACTTCA AGAGAGAAAA TGATAAGAAA GTTTGCATCT TGGGGTTGAC ATCACTTTTC AATCTTCCAG CTGGTCAATT ACCCGGAGAG GTTTTGCCAC ATGTATTCAG GGCTCTTCTC GAGCTTTTAG TGGCATACAA GGATCAACTT GCTGAAGCTG CAAAGGCAGA AGAGGAAGAA GAAGAAGAAG ATGGTGATGA CGACGACATG GATGAATTCC AGACAGATGA TGAAGATGAG GACGGCGATG ACGAGAATCC AGATGAGACT GATGGAAGTA CACTCCGCAA GTTAGCAGCA CAGGCAAAGG ACTTCCGCTC TTACAGCGAC GATGATGACT TTTCAGACGA TGATTTTAGC GATGACGAGG AATTAGACTC TCCAATTGAT GAAGTGGATC CTTTCGTACT CTTCATGGAT GCAGTCACAG CAATGCAAGT ATCTGACTCG CCAAGGTTCC AAAGCCTTAC CCAGACACTA GACCCGCACT ACCATGGACT CGCAAGCACA ATAGCTCAGC ACACGGAGCT GAGAAGATCC GAGATTCTAA AGGAGAAACT TGAGAAGCAA TCTTCTGCAA CGGTTGCTTC CTAATTTCTC CACGGCTCAG TCCTTGAAAA AACAAATCGT TGGCGCTCTC ATTTGGCTGC ATTTTTTCAT AAGCCTCTTT ATATCCCTCA AAAGTAGAGA GGCTTGTAGA GGTGAGTCTG GTCGACTCTC ATTAGTCTGT CATGTCTTAA GAGAGACCAA TCTCTACCAT CTCCAGTTTT GCATTTCTTC ATCATCATCA TCATTCTTTC TTTTTTTTTT TAATCATCCA AAAGACCAGC AAGACAAAAG ACTAAACCCA TTTCGGGTTC CTTTTTTATT TTAGACAGAA CAGAGATCCC TTTGGGGGGT TTTATGTTCT CCGATTCGGA TTTTGGAGGC AGATATAAAA AAAGCACATA GTTTTTTTTT ATGTTTGTCA CATTTATTAT TGCTTGATAT GAGTCGTTCT TTGCACTGTC TACAATAAGA TTAGAATTAT ATTT 
Length3664
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18106408.. 18113408
Download Sequence
A.thaliana
AGI-codeAT3G59020.2
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Ahg489809 calcium-dependent protein kinase 4
7.34847 Ahg947537 crooked neck protein, putative / cell cycle protein, putative
10.0995 Ahg494332 Tetratricopeptide repeat (TPR)-like superfamily protein
10.198 Ahg474570 DEA(D/H)-box RNA helicase family protein
13.9284 Ahg945361 RNA-binding (RRM/RBD/RNP motifs) family protein
17.8885 Ahg912012 proteasome beta subunit C1
26.9258 Ahg340908 glucan synthase-like 10
32.4037 Ahg923761 NUP50 (Nucleoporin 50 kDa) protein
33.6601 Ahg488236 Transducin/WD40 repeat-like superfamily protein
34.8712 Ahg923366 elongator protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression