Detail



ID : Ahg486375

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486375|fgenesh2_kg.5__2367__AT3G59080.1
Sequence
ACTCTGTTCT TTCCTCTTCT TCTTCTTCCT CTCTCTAAGC TTAATTTTCC TCTATTCCTC CAAAATCAAA ATCTGCTACA ATCGAAACTA ATAAAAGCTC AACTTCTGCT TCTGTCACTT TTTATTCCCG GCGACTCGAA GCTTAATCGT CGCCGGCGAT TTTTTGTTCT CAAGCATTTA TTATCCTAAT GTTTTCCAAG TACAGTTTCA TTCTTTGTCT TATTTTCTTC TTCGTCACAG CATTTTCCGG CGACTCCAGA GCTCTTGCTG GAAACAATGA GCAGAAGAAG AACATCTCTG GCTTTTCTGG GATTGACTTT CCTAATCCGA TGCGTTTCGG TTCTGTTTCT TCTTCCTCAA GCAACGATTG CGGCTTCTCT TCCTCTGAGA ACGAACCAAC CAAGGAACGG ACCGGAGAAA ACAAGACGGT GAAGTTTCAC TTAAAGCGCC GAGAGTCTAC GACTACAGAG AAGACAACAA CAAATTCAGT TCTTGAGCTT CAAATCCGAG ATCTCACAAG AATTCAGACG CTTCACAAAA GGGTTTTGGA GAAGAAGAAC CAAAACACTG TTTCGCAGAA GCAGAAGAAG AAGAATAAAG AAGTCGTTAC CACTCCGGTG GCTTCTTCCG TGGAGGAGCA GGCTGGTCAA TTGGTGGCAA CGCTTGAGTC TGGTATGACT CTTGGTTCTG GCGAGTACTT CATGGACGTG TTGGTTGGTT CGCCACCAAA ACACTTCTCC TTGATTCTTG ATACAGGGAG TGACCTAAAC TGGATTCAAT GCTTGCCTTG CCACGACTGT TTCCAGCAAA ACGGTGCGTT TTATGACCCT ACAGCCTCTG CTTCTTACAA GAACATAACT TGCAATGACC CAAGATGCAA TCTAGTCTCA CCACCTGACC CTCCAAAGCC CTGCAAATCA GATAACCAAT CATGCCCTTA CTACTACTGG TATGGGGATA GCTCCAACAC TACCGGAGAT TTTGCAGTCG AGACTTTCAC GGTTAATCTC ACTACAAGTG GAGGGAGCTC GGAGTTGTAT AATGTCGAAA ACATGATGTT CGGTTGTGGT CATTGGAACA GAGGTCTCTT CCATGGTGCT GCAGGCTTGC TTGGGTTAGG AAGAGGCCCG CTTTCGTTTT CCTCTCAGCT TCAGTCTCTT TATGGTCATT CCTTCTCATA TTGCCTTGTT GATAGAAATA GCGATACCAA TGTTAGTAGC AAATTGATTT TTGGGGAAGA CAAGGATTTG TTGAGCCATC CGAATCTGAA CTTCACTTCT TTTGTCGCTG GGAAAGAGAA CCTCGTCGAC ACATTTTACT ACGTACAGAT CAAATCCATT ATAGTCGCGG GAGAAGTACT AAAGATACCT GAAGAAACAT GGAATATCTC ATCAAATGGA GCTGGAGGTA CAATCATCGA TTCGGGTACA ACCTTAAGTT ATTTCGCGGA ACCTGCATAT GAATTCATCA AGAACAAGAT AGCAGAGAAA GCGAAAGGGA AGTACCCGGT TTATAGAGAT TTCCCAATCC TAGATCCTTG TTTCAACGTC TCTGGCATCG ATAACATTCA GCTGCCAGAG CTTGGGATTG CTTTTGCAGA TGGCGCGGTT TGGAACTTCC CAACAGAGAA TTCTTTCATA TGGTTGAATG AGGATTTGGT TTGCTTGGCA ATTCTTGGAA CTCCCAAATC AGCCTTTTCA ATCATTGGAA ACTACCAGCA GCAGAATTTT CATATACTAT ATGATACAAA GAGGTCCAGG CTCGGGTATG CACCTACAAA GTGTGCTGAT ATATAACCTT TCTTGTCAAT TATACAGATT TTAAGTCCAT CAAAGCAACT GTACACACAA TAAGAACAGA TTCATTTTTT TTTCCCTTTA GATTTTTTCA TTCTTTAGGA TATTCCTTTA AACATGTATT GAACTAAGAT CATACCAAAC TAATGTACTT ATTCAAACTT CATTTCTAAA TACAAAGT 
Length1978
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18129893.. 18131884
Download Sequence
A.thaliana
AGI-codeAT3G59080.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.6132 Ahg900537 Disease resistance protein (TIR-NBS-LRR class) family
17.2337 Ahg485608 syntaxin of plants 122
28.775 Ahg327678 cyclic nucleotide-gated channel 13
30.6594 Ahg470722 exocyst subunit exo70 family protein B2
31.749 Ahg486969 O-fucosyltransferase family protein
32.1559 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
34.4093 Ahg493126 ethylene responsive element binding factor 1
35.242 Ahg327275 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
37.9737 Ahg484026 phosphatidic acid phosphatase 1
39.7618 Ahg472692 Actin cross-linking protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression