Detail


ID : Ahg486447

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486447|fgenesh2_kg.5__2439__AT3G59820.2
Sequence
CTGTTCTCTT CCGGGAGATG TCCTGGTGAT TCATCTTTGC ACAACAAGGG TTTTTACAAA ATGGCGTCAA GAGCGATCGT TAGGAGAAAG AACATCATTT CCGATTACTT GAATGTCTAT GCTCGCTCAA TTCAGAGCTT TCAGTCCATT GGAAACTCCT CTCAGACGGT TCATTCACAT GCTTACCACT CTGGTGTTAA CCGTCCTCCT GTGGAAACTA AACGTGTGAC CCAACACAAG TCCTTTACAA GAAGAGATGG TCTTCTATTG CTTTCTAGAA ACGGATATTT CAATCGTAGC TTTCATGGTT TTCACTCCTC GGGCATTGGT TATGGAAGTT CAGGAGTTGG TCCTTCTCTG GGGATGAGAT ATGTAAGCCT ATCCATTCGT AATGCTACTA CAGTTGCAGC TAAGCAACCG GAAGAAGAGG ATAAAAAAGT TGATGAGCTT GCTAAGAACA GGAAAGAAGC ATCTCCTGAG GAATGTGACC AAGCTGTTGA AAGTCTGAGC AGTGTTAAAG CAAAAGCGAA AGCTAAACGT CTTCAAGAAT CGAAAAAGGT TGCTCGATCT ATAGTACAGA GGGCATGGGG AATTGTTCTT AAGATAGGAC CTGCTTTAAG AGCTGTTGCC TCCATGAGCA GGGCGGATTG GGCAAAAAAG CTCTCTCACT GGAAACAAGA GTTTGTATCA ACATTGAAAC ATTATTGGCT GGGGACCAAA TTACTCTGGG CAGACACTAG AATCAGTTCA AGATTGCTGC TCAAGTTGGC TGGTGGAAAG AGTCTCTCCA GAAGAGAAAG GCAACAGCTA ACTCGAACAA CAGCTGATAT CTTTAGATTA GTGCCATTTG CTGTGTTCAT CCTTGTGCCG TTTATGGAGT TTTTGCTGCC AGTTTTCTTG AAGCTCTTCC CTAATATGCT ACCGTCAACT TTCCAGGACA AGATGAAAGA AGAGGAAGCT TTGAAAAGGA AATTACTTGC AAGAATAGAA TATGCTAAGT TTCTTCAGGA AACGGCCAAA GAGATGGCTA AGGAAGTTAA ACATTCAAGA ACTGGAGAAG TAAAGAAAAC CGCTGAAGAC CTGGATGAGT TTCTAGACAA GGTTCGAAGG GGTCAAATAG TCCAAAATGA CGAACTTTTG GGCTTTGCAA AGCTTTTCAA TGATGAGCTT ACTTTGGATA ACATTAGCAG GCCTCGCTTG GTTAGCATGT GCAAATATAT GGGTATTAGC CCATATGGAA CAGATGCTTA TCTGCGGTAT ATGCTCAGAA AAAGACTGAG GAGCATTAAG GAAGATGATA AACTGATTAG AGCTGAGGGT GTGGATTCCC TTTCAGAAGC TGAGCTACGG GAAGATTGCA GGGAACGTGG AATGCTGGGA CTGGTTTCAG TTGAAGAGAT GAGGCAACAG CTTCGCGATT GGATGGATTT GTCACTTAAT CATTCTGTCC CCTCGTCGTT ATTGATCCTC TCTAGGGCAT TCACGGTTGC TGGAAGAGTT AAAGCAGAGG ATGCTGTCCG AGCTACTCTT TCTTCTCTAC CAGACGAGGT TGTGGATACT GTTGGTATTA CTTCTCTGCC ATCTGAAGAC CCTGTTTCTG AGCGAAGAAG GAAATTAGAG TACCTTGAGA TGCAAGAAGA ACTGATCAAG GAAGAAGAAG AGAAAGAAGA AGAAGAGCTT ACAAGGATTA AGGATGTTAA AGGTGGTGAA GAGGATAAGG CACTGCAAGA GATGACCATA CCAACAGCTA GCGAAGCACA AGAACAGGCC AGAGCTAGAG TTCTTGAACA ACAAGATGAT CTTTGCAAAC TTAGCCGTGC ATTGGGCGTT TTGGCTTCTG CTTCTTCGGT GTGTAGAGAG CGCGAAGAAT TCCTGAGATT GGTCAAGAAA GAGATGGAGT TCTATAACAC AATGGTCGAG AGAGAAGATG TAGATGGTGA AAAAGCTGCA ATGAAGGCAT ACAAAGCAGC TAGAGAAGAT ATTGACCAAT CTGATGAAGT TGCTGAAGCA GACGAGGTTT CCTCTGCACT AATGGAAAAG GTTGATGGTC TGATACAAAA CCTAGAGAAG GAAATTGATG ATGTGGATAT CAAAATTGGC AAAGGCTGGC AGCTTCTTGA CAGGGATCGA GATGGAAAGG TCACACCTGA TGAAGTTGCA GCTGCTGCAA TGTACCTGAA AGACACACTC GCTAAGGACG GCCTTCAACA ACTAATCAGT AGTCTCTCCA AAGATAAAGA GGGAAGAATT ATGGTGGAAG ACATTGTAAG GTTGGGGAGA TTGGGAAGCA AGCCAGAAGA AAATGCAACG GAAGAAGAAT CAAACTGAAG GAAATAATAC TAAGATTTTA AGACACTTTT AGACTTTTAG TAGTAGTGAA GAGAGTTTTA TTGAGAGAAA CTCTATTTCA GGTTTTGCTG CTTAGACACA AGCAGTCTAC TTACATATAC AAGCGGCTAA GAGTGTGAGA CCTTTTAACA TTACGCCAAG AATGATATCT TGAGCGTATT ATTT
Length2514
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18471550.. 18475309
Download Sequence
A.thaliana
AGI-codeAT3G59820.2
DescriptionLETM1-like protein
TAIR curator summary
Alias[AtLETM1][LETM1][leucine zipper-EF-hand-containing transmembrane protein 1]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg486162 P-loop containing nucleoside triphosphate hydrolases superfamily protein
7.74597 Ahg928461 HEAT SHOCK PROTEIN 89.1
8.88819 Ahg497128 Homeodomain-like transcriptional regulator
9.94987 Ahg483978 B-box type zinc finger protein with CCT domain
10.3923 Ahg935276 Sas10/U3 ribonucleoprotein (Utp) family protein
10.4403 Ahg486159 homologue of NAP57
10.583 Ahg926900 flavodoxin family protein / radical SAM domain-containing protein
10.9087 Ahg478548 RNA binding;RNA binding
13.8564 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
14.3527 Ahg928085 NOP56-like pre RNA processing ribonucleoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression