Detail



ID : Ahg486638

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486638|fgenesh2_kg.5__2630__AT3G61530.1
Sequence
AATTCCAAAA TCGCTTTCAT CAGCAACAAC AATGGCTGCT TCGCTCGTCA GGAGTTGCTC TCGTGCTTCG AGGGCCATCA CCACCGTCCG GTTTATGAGC AACGTACCGG AGAACACGGT TTACGGAGGA CCGAAATCGC AGAACCCGAA TCAGAGAGTG ACTTTGACGC AATTGAGACA GAAGCATCGG AAAGGTGAGC CGATTACTAT GGTCACCGCC TATGATTATC CGTCTGCCGT TCACATCGAT ACAGCCGGAA TTGATGTTTG TCTCGTCGGA GATTCAGCTG CAATGGTTGT TCATGGCTAT GACACCACTC TTCCTATCTC CTTAGAGGAG ATGCTTGTTC ACTGTCGCGC CGTCGCTCGT GGAGCCAAAA GACCACTTCT TGTTGGCGAT TTGCCATTTG GTACTTATGA ATCTAGCACC AATCAGGCGG TTGATACTGC AGTAAGAGTG TTGAAAGAAG GAGGAATGGA TGCTATTAAA CTTGAAGGAG GATCACCTTC AAGGATCACT GCTGCAAAAT CCATTGTGGA AGCAGGAATT GCTGTTATGG GACATGTTGG GTTGACTCCT CAAGCTATCA GTGTTCTTGG TGGTTTTAGG CCACAGGGCA AAAACATTGC TAGTGCTGTT AAGGTTGTGG AAACTGCAAT GGCTTTACAA GAAGCTGGAT GTTTTTCGGT TGTTTTAGAA TGTGTTCCGC CTCCTGTGGC TGCTGCTGCA ACCTCTGCTC TTCATATTCC AACCATTGGC ATAGGAGCTG GCCCTTTCTG CAGTGGTCAG GTTTTAGTCT ACCATGATCT TCTGGGAATG ATGCAGCATC CACATCATGC TAAGGTTACT CCAAAGTTTT GCAAACAGTA CGCTCAAGTA GGAGAAGTGA TCAACAAAGC CCTCTTAGAG TATAAGGAAG AAGTATCTAA ACACTTGTTT CCAGGTCTTT CTCATAGCCC TTACAAGATC GCCTCAAGCG ACCTGGACGG ATTCTTAAGC GAGTTACAGA ATCTGGGATT AGATAAGGCT GCTTCTGCTG CAGCAGCATC AGCTGAAAAG ATGGAGCATT CAGATTCACC ATCTTCTCAG TGACAAAGCT GTACCAATTC TCTTAGCTCT TCATTTTGAG TAGGCAGGCA GATCTGGTTC AAGAAATAAA AATCCTTTAA TAGGATAGTT TTTTGCGGGT AAAATTAGTG TAATCCATAG GAGCTATTTC A 
Length1221
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19217317.. 19218998
Download Sequence
A.thaliana
AGI-codeAT3G61530.1
DescriptionPhosphoenolpyruvate carboxylase family protein
TAIR curator summaryEncodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.
Alias[PANB2]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg477163 P-loop containing nucleoside triphosphate hydrolases superfamily protein
17.6635 Ahg316941 partner of SLD five 1
23.0868 Ahg483627 SNF2 domain-containing protein / helicase domain-containing protein
24.3105 Ahg902559 glycoprotease 1
40.9023 Ahg488030 Translation initiation factor SUI1 family protein
41.4729 Ahg483719 DEA(D/H)-box RNA helicase family protein
48.8467 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
52.3163 Ahg941965 prolyl oligopeptidase family protein
54.5527 Ahg476486 RNA-binding (RRM/RBD/RNP motifs) family protein
57.2364 Ahg935133 protein phosphatase 2A-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression