Detail



ID : Ahg486723

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486723|fgenesh2_kg.5__2715__AT3G62100.1
Sequence
ATAAAATCAT AGAGAGAGAG AGAATAGTAA AATAAAAAAA TGGGAAGAGG GAGAAGCTCA TCGTCTTCAT CGATAGAGAG CAGCTGCAAA AGCAACCCAT TTGGTGTCTC TTCGAGTAAT ACTCGGAACC TAAGCACGGA CCTAAGGCTC GGGCTCAGCT TCGGATCATC TTCCGGACAA TACTACAACG GTGGAGAAAA CCATGAGTAT GATGGAGTCG GTGCGGCAGA GGAAATGATG ATCATGGAAG AAGAAGATCA AAACGAGTGT AATAGTGTCG GAAGCTTCTA CGTGAAAGTG AACATGGAAG GAGTTCCTAT TGGAAGAAAG ATCGATCTTT TATCTCTTAA TGGATATCAT GATTTGATCA CAACTCTTGA CTACATGTTC AATGCCTCAA TCCTTTGGGC TGAAGAAGAA GAGATGTGTA GTGAGAAGAG TCACGTGCTA ACGTACGCAG ACAAAGAAGG TGACTGGATG ATGGTTGGAG ATGTTCCATG GGAGATGTTC TTGTCTAGCG TGAGAAGACT AAAGATCTCA AGAGCTTATC ACTACTGAAT GTTTTTTTAA AAAGCAGAGG TGGAAGACTC TAGGATTGAC CAATACAGTC AGTGGTGGAA AAAAAAAGTT AGTTTTGTCT GAATGTAAAT CACTTGTTCG AGATTTTTAT TCAAATTTTG TTTCTAGTTT AATTTATTAC TTTTATAACA AAATCGGTTG TAACTTGTAA TG 
Length732
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19554421.. 19555396
Download Sequence
A.thaliana
AGI-codeAT3G62100.1
Descriptionindole-3-acetic acid inducible 30
TAIR curator summaryEncodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. Target of LEC2 and AGL15. Promotes somatyic embryogenesis.
Alias[IAA30][indole-3-acetic acid inducible 30]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg352473
17.9165 Ahg932628
33.7639 Ahg913808
53.7773 Ahg330281
53.8888 Virus3302
60.1997 Ahg926435 F-box and associated interaction domains-containing protein
61.6441 Ahg933796 CCT motif family protein
68.2129 Ahg942976
81.3757 Ahg470522 Peroxidase superfamily protein
90.4986 Ahg938783 VQ motif-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression