Detail



ID : Ahg486880

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486880|fgenesh2_kg.6__14__AT5G01890.1
Sequence
TAGTAATAAA AAGCGGGGAG AAGAGAAGAT TGTCTCCTAG ACTTGAATCC TTGAGCCTCC TCCTCTCCGG AACCTCCCTT TTCTCTTTAC TCTCTCTATC TCTCTCTTTT TCCTTTGGCC TAGTAAGTTT ATCTTTTGGG GGTCTGTCTT AATTCCACCA TTAATGCTCT CTACCTTCCT CCCGTTTACT CTCCTGCTTT TGTATTTTCT CTTTCTCTTT TCCTAAACCC TTTCAAACTC TGCCTCTTCT TCTTTCTTTT TCTCAAATAA CAACAACAGT TTCTTATGCT CATGTTAATT CTGCAGCAGT TTTTTCCGGT ACAAAGAACC TTACTTGAGC TCTGCATCAT CCATGGCCAT GGCCGAGTAG CCTTCTTTCT TCTTTGTTTG CCTTCTTCCT CTCGTCCTCT TCCGGAAATG TTGTTCAACG ACGCCGTTTC ACTCCTCTTC CTCTTCTTCC TTGCCGTTTC AGCGACGGCA GACCCGACAT TCAACGACGA CGTTTTGGGT CTCATCGTTT TCAAGGCTGG ACTCGACGAC CCTCTCTCTA AGCTCTCTTC TTGGAACTCC GAAGACTACG ATCCCTGCAA CTGGGTCGGT TGCACATGCG ACCCTGCCTC CAATCGGGTC TCGGAGCTCC GACTTGACTC CTTCTCTCTC TCCGGTCACA TCGGCCGTGG CCTTCTCCGT CTCCAGTTCC TCCACACCTT GGTCCTCTCC AACAACAACC TCACCGGAAC CCTAAACCCC GAGTTCCCTC ACCTCGGCAG CCTCCAAGTC GTCGATTTCA GCGGCAATAG CCTCTCGGGT CGGATCCCAG ACGGGTTCTT CGAGCAATGC GGGTCCTTGA GGTCCGTCTC CTTGGCCAAC AACAAACTCA CAGGTCCTCT TCCTGTCTCC CTCAGCTACT GTTCTACTCT CATTCATCTT AACCTCTCAA GCAATCAACT TTCCGGGAGA TTACCACGAG ATATCTGGTT CCTCAAGAGC TTAAAGTCCC TTGATTTATC TGTCAATTTC CTCCAAGGAG ATATCCCCGA TGGCCTCGGC GGTCTCTACG ATCTCCGTCT CTTTAACTTA TCCAGAAACT GGTTTTCCGG TGACGTTCCT TCCGACATCG GAAGATGTCC TTCCCTGAAA TCGCTTGACT TGAGTGAGAA CTACTTCTCC GGGAATCTTC CGGCTTCCAT GAAAAGCCTG GGCTCTTGCC GCTCCATCCG ACTGCGAGCA AACTCTCTCA TCGGAGAAAT CCCTGATTGG ATCGGTGACA TTGCCACTCT CGAGACTCTT GATCTCTCCG CCAACAACTT CTCCGGCACT GTCCCATCCT CCCTCGGAAA TCTCGAGTTT TTGAAGGAAC TCAATCTATC CGCAAACATG CTCGCTGGGG AGCTCCCGCA GACCATCTCC AACTGCTCCA ACCTAATCTC CATTGATGTC AGTAAGAATT CATTCACAGG AGATGTGCTT CAGTGGATGT TCACCGGAAA CTCTGAAAGT CCCTCGCTTT CCAGATTTAG CCTCCACAAA AGATCAGGGA ACGACACCAT TCTGCCCATC GTCGGATTCC TTCAAAGTCT CCGGGTCCTC GATCTGTCTT CGAACGGGTT TACCGGTGAG TTACCGTCTA ACATTTGGAT CCTCACAAGT TTGTTGCAGC TGAATATGTC CACCAACTCT CTGATCGGTT CCATACCCAC CGGCATTGGA GGATTGAAAG TCGCTGAGAT TCTTGATCTG AGTTGTAATC TTCTCAACGG AACCGTTCCT TCTGAGATCG GAGGAGCCGT CTCCCTAAAA CAACTTCATC TCCAGAGAAA CCGCCTCTCC GGCCAGATTC CGGCACAAAT CTCTAACTGT TCGGCTTTAA ACGCAATAAA TCTGTCGGAG AATGAACTAT CCGGTGCGAT TCCGGGGAGC ATTGGCAGTT TGAGCAACCT TGAGTACATT GACCTGTCGA GAAACAATCT CTCGGGAAGC CTACCAAAAG AAATAGAGAA ACTTTCGCAT CTCTTGACCT TCAACATCTC CCACAACAGC ATCACAGGGG AGCTGCCAGC TGGAGGTTTT TTCAACACCA TCCCTCTCTC TGCCGTCGCC GGAAACCCAT CCCTCTGTGG CTCCGTTGTG AACCGCTCAT GTCTCTCTGT CCACCCCAAA CCAATCGTCC TCAACCCCAA CTCCTCCAAT CCAACCAATG GTCCTGCTCT CACCGGGCAG ATCAGGAAGA GCGTTCTGAG CATATCTGCG CTCATTGCGA TTGGCGCAGC CGCCTTCATT GCCATCGGGG TGGTGGCCGT AACTCTTCTC AACCTGCACG CCCGATCTAG TCTTTCCCGT CACAATGCAG CTGCTGCTCT AGCTCTGTCG GTTGGAGAAA CGTTCAGCTG TTCCCCAAGT AAAGATCAAG AATTCGGAAA GCTGGTGATG TTCTCTGGCG AAGCGGACGT GTTTGACACC ACAGGCGCTG ATGCGTTGCT CAACAAGGAC TGCGAGCTGG GACGAGGCGG GTTCGGAGTG GTGTACAAAA CGAACCTCCA GGATGGGCGT CCTGTTGCTG TCAAGAAACT GACTGTGTCG GGTCTAATAA AGTCGCAGGA GGAGTTCGAG AGAGAGATGA GAAAACTCGG GAAGCTGAGG CACAAGAATG TGGTGGAGAT TAAAGGGTAC TATTGGACGC AATCGCTGCA GCTCCTGATC CACGAGTTTG TTTCAGGCGG AAGCTTGTAC AGACATCTCC ACGGAGATGA GAGCCTTTGC CTAACGTGGC GTCAACGTTT CAGCATCATT CTAGGGATAG CAAGAGGTCT TGCTTATCTG CATAGCAGTA ACATCACTCA CTACAATCTG AAAGCAACGA ATGTGCTCAT AGACGCCACA GGGGAGGCTA AAGTCTCTGA CTTTGGGCTG GCCAGATTGT TGGCTTCGGC GCTGGACAGG TGTGTCTTGA GTGGAAAGGT ACAGAGCGCG TTGGGGTACA CAGCCCCGGA ATTTGCATGC CGGACAGTCA AGATAACCGA CAAGTGCGAT GTTTACGGGT TTGGGATCCT GGTGCTTGAG ATGGTGACAG GGAAGAGGCC TGTGGAGTAC GCTGAGGACG ACGTGGTGGT GCTGTGTGAG ACGGTGAGAG AAGGGTTAGA AGAAGGGAGG GTGGAGGAGT GCGTCGACCC TCGGTTGAGA GGGAATTTTC CGGCGGAGGA GGCAATACCG GTGATTAAAC TAGGGCTGGT ATGTGGGTCC CAAGTGCCGT CAAATAGGCC GGAGATGGAG GAAGTAGTGA AGATATTAGA GCTCATACAG TGTCCCTCTC ATGACTTAGA GTGATTCATC CACTACGGAT GAATCAATCC TCCTTGCTTG TATTTCTTCA TTCCTTTCAA TTTTCATATA TTATCATAAT ATAGTGTTCG TCTTTTCTAA AAA 
Length3423
Protein Sequence
Protein Residue
Map Locationscaffold_6: 49570.. 53256
Download Sequence
A.thaliana
AGI-codeAT5G01890.1
DescriptionLeucine-rich receptor-like protein kinase family protein
TAIR curator summary
Alias[PXC2][PXY/TDR-correlated 2]
Gene coexpression
MR
MR Locus Description
22 Ahg927512 structural molecules
22.9783 Ahg480193 O-Glycosyl hydrolases family 17 protein
23.3238 Ahg932026 like AUXIN RESISTANT 2
23.4521 Ahg325786 glucan synthase-like 12
25.7294 Ahg925647 Zinc-binding dehydrogenase family protein
30.133 Ahg480375 arabinogalactan protein 9
30.7409 Ahg481491 Leucine-rich receptor-like protein kinase family protein
32.218 Ahg913522 Patched family protein
34.9285 Ahg473698
37.6298 Ahg927503 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression