Detail



ID : Ahg487148

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487148|fgenesh2_kg.6__282__AT5G03680.1
Sequence
TTCTCTCTTT TTTTGGAATT AAAAGGTTTA ACCTTTACCG TTTTTTTCCC TTCACTATCG ATAGATTGAT CTTCTCTTTC AGCTGAATAG AAATCTGAAA ACAATGGATC AAGATCAGCA TCCTCAGTAC GGTATACCGG AGCTCCGGCA GCTCATGAAA GGCGGAGGAA GGACGACCAC GACAACACCG TCTACTTCTT CTCATTTTCC CTCTGATTTT TTTGGTTTTA ACCTCGCTCC TGTGCAGCCA CCGCCGCACC GTCTTCATCA GTTCACTACT GATCCAGATA TGGGTTTCTT GCCACGTGGC ATACATGGAT TGGGTGGAGG AGGTTCTTCG ACGGCTGGAA ATAACAGTAA CTTAAACGCG AGTACTAGTG GTGGAGGAGG TGTTGGGTTT AGTGGGTTTC TTGACGGTGG TGGTTTCGGC GGCGGAGGTG GAGGAGAGGG TGGAGGAACT GGAAGGTGGC CGAGACAAGA AACCCTAACT CTGTTGGAAA TTAGATCTCG TCTTGATCAT AAATTCAAAG AAGCTAATCA AAAAGGACCT CTTTGGGATG AAGTTTCTAG GATTATGTCC GAGGAACATG GATACCAAAG GAGTGGGAAG AAATGCAGAG AGAAGTTTGA GAATCTTTAC AAATACTATA GGAAGACTAA AGAAGGCAAA GCCGGAAGAC AAGACGGAAA ACATTACAGA TTTTTCAGGC AGCTCGAAGC ACTCTACGGC GATTCCAATA CCTTGGTTTC TTGTCCTAAT CATAACACGC AGTTCATGAG CAGTGCTCTT CATGGTTTCC ATACTCAAAA CCCTATGAAT GTTACTACAA CAACGTCCAA CATCCATAAC GTCGATAGTG TTCATGGTTT TCATCAGAGC CTTAGTCTTT CTAACAACTA CAACTCCTCC GAGCTTGAGC TGATGACTTC CTCTTCGGAA GGGAATGATT CTAGTAGTAG AAGGAAAAAG AGGAGTTGGA AAGCGAAGAT AAAGGAGTTC ATTGATACGA ACATGAAAAG GTTGATAGAG AGGCAAGATG TTTGGCTTGA GAAGTTGACA AAGGTTATTG AAGACAAAGA GGAGCAACGG ATGATGAAGG AAGAGGAATG GAGGAAGATT GAAGCTGCAC GGATTGATAA AGAGCATTTG TTTTGGGCTA AAGAGAGGGC GAGGATGGAA GCTAGGGATG TCGCGGTGAT TGAGGCATTG CAATACTTGA CAGGAAAGCC ATTGATAAAA CCGTTATGTT CGTCGCCAGA AGAGATTAAT GGTAATAATG AGATCCGAAA CAATAGTGAG AATCAGAATG AGAATGGAAG CGATCAAACA ATGACTAACA ATGTTTCTGT TAAAGGAAGT AGTAGCTGCT GGGATGAGCA AGAGATTTTG AAGCTTATGG AGATAAGAAC GAGCATGGAC TCGGCGTTTC AAGAGATATT GGGAGGGTGC TCAGATGAGT TTTTATGGGA GCAAATCGCG TCGAAGTTGA TTCAGTTAGG GTTTGATCAG AGAAGTGCCT TATTATGCAA GGAAAAGTGG GAATGGATAA GTAATGGAAT GAGGAAAGAA AAGAAGCAAA TGAACAAGAA AAGAAAGGAT AATTCGTCGA GCTGCGGCGT GTACTATCCG AGAAATGAAG AAAATCCAAT CTACAATAAT CAAGAAAGTG GATATAATGA TAATGATCGG CATCAGATGA ACGAACAAGG CAATGTAGGT TCTTCAACAT CAAACGCAAA CGCAAACGTA ACCGCTGGAA ATCCGAGCGG CGCAATGGCA GCTAGTACAA ACTGCTTCCC GTTCTTCATG GGAGATGGAG ATCAGAATTT GTGGGAGAGT TATGGTTTGA GGCTAAGTAA AGGAGAGAAT CAGTAAGTAA TTTCTCTCAA TAATGAAGAA GAAGAAGAAG AAGGTAATCA TGTGGTTAAC TAATTCTTTT GAGTTAGCTA TATATGAGAT AAACCTTGAC TTAGCTATTA TATGTCACAT TATGTTTAGA AATTGAGAAA TATTTGTTGG GGCTTAACGA ATTATATATC AACATATATA AGATTACAAA GTCTAAGAAT TAAATCAAAT TAGGCTTTAA CCAACGATTA TATATTATGT TTTCATGTAT TCATTCTGTA AGACTTT 
Length2137
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1076527.. 1079747
Download Sequence
A.thaliana
AGI-codeAT5G03680.1
DescriptionDuplicated homeodomain-like superfamily protein
TAIR curator summaryRecessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.
Alias[PTL][PETAL LOSS]
Gene coexpression
MR
MR Locus Description
47.2758 Ahg323966
58.7878 Ahg320430 1-phosphatidylinositol-4-phosphate 5-kinase 3
90.1831 Ahg316947 Pectin lyase-like superfamily protein
95.373 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression