Detail



ID : Ahg487235

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487235|fgenesh2_kg.6__369__AT5G04530.1
Sequence
ACACAATTCA CTAAATTCTC ACATACTCTC TTTCTTTTTC TCTGTGTTTC TTTCTCTTTC TTTCTTCCAT GGAGCTCTTC TCACTTTCTT CTCTGCTCCT ACTCTCCACT CTCTTCCTCT TCTACATCTC CAAATTTGTT CTCAAAAGAA GAAACCAGAG AAAATGCTAC ATGCTTCACT ACGAGTGCTA CAAGGGCATG GACAAGAGAA AACTCGACAC CGAGACTTGT GCTAAGGTCG TTCAACGAAA CAAGAACTTG GGTCTTGAAG AGTACAGGTT TCTCCTTCGT ACAATGGCTA GTTCCGGGAT TGGAGAGGAA ACGTACGGTC CAAGAAACGT GCTTGAAGGT AGAGAAGACT CTCCTACTCT CCTCGATGCT CACTCCGAAA TGGACGAGAT CATGTTCGAC ACTCTCGACA ATCTTTTCCA CAAGACAAAA GGCTCAATCT CTCCTTCAGA CATCGACATT CTCGTAGTCA ACGTCTCACT CTTTGCTCCA TCTCCTTCTC TAACCTCACG AGTCATCAAC AGATACAAGA TGAGAGAAGA CATCAAATCC TTCAACCTCT CGGGCCTAGG GTGTAGCGCG AGCGTTATAT CGATAGATAT CGTGCAAAGG ATATTCGAAA CTACTGAAAA TGCTATCGCA CTCGTGGTTA GCACCGAGAC AATGGGTCCT CACTGGTACT GCGGTAAAGA TAGGTCAATG ATGCTCTCAA ACTGTCTCTT CCGTGCCGGA GGAAGCTCTG TTCTGTTAAC CAACGCAGCT CGGTTCAAGA ACCGGGCTTT GATGAAGCTC GTGACTGTGG TCCGGGCCCA TGTGGGTTCA GACGACGAGG CCTACTCGTG CTGTATGCAA ATGGAGGACA GAGATGGTCA TCCAGGTTTT CTCTTAACCA AATACCTAAA AAAAGCCGCA GCTCGAGCCC TAACCAAAAA CCTCCAAGTT CTCCTCCCTA GAGTCTTGCC TGTCAAGGAA CTGATTCGCT ATGCGATAGT TCGTGCGCTT AAACGAAGAA CCACCGCGAA AAGAGAGCCT GCAAGCTCGG GGATAGGTCT AAACCTAAAA ACAGGGTTGC AACATTTCTG TATTCACCCC GGAGGAAGAG CGATTATCGA AGGAGTCGGA AAAAGTTTAG GGCTCACGGA ATTCGACATC GAGCCAGCGA GAATGGCGCT TCATAGGTTC GGGAACACGT CTTCTGGTGG TTTATGGTAT GTTCTTGGTT ACATGGAAGC TAAGAATAGA TTAAAGAAAG GTGAGAAGAT ACTAATGATG AGTATGGGAG CTGGATTCGA GTCTAACAAT TGTGTTTGGG AGGTTCTTAA GGATCTTGAT GATAAGAATG TTTGGGATGA TTCCGTTGAT CGATATCCGG AATTGTCGAG AATCCCTAAT CCATTCGTTG AGAAGTATGA TTGGATCAAC GACGATACCA TGAGCTTTGT TCGTGTTGAT TGATCACAAG TAAGCAAAGA AAAACAAGAT CGAAACATTT TTATTTATTT TTAAATATAT TTATCAATCA ATTGGTTATA AGAAATGTTT CTTTATTAGG CGATATTTCG AAGTTTGGAT TATTTGGAAT GTTTAGACCA ACAAGTTGCT ATAGTCGACG ATTGATTTTT TTTTAATTTC AATTTAAATT TGAAATAAAT AAAGCATGTT TATTTTACAA ATTGATTGTA GATTTTGACT AGTAACGACC AATTGCTGTG TTTTAGAACA GTAACAAAAA GATTGTGTAT TCAAGTTGGT GCATTTATTT TGTCAGATTT GCATTATTGT GGCATACCTA TTTATGAGTA AGACCAACAA TAAATCTCAT GTGTGTTCAC AGAT 
Length1844
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1472152.. 1474023
Download Sequence
A.thaliana
AGI-codeAT5G04530.1
Description3-ketoacyl-CoA synthase 19
TAIR curator summaryEncodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS19][3-ketoacyl-CoA synthase 19]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg470654 Fatty acid desaturase family protein
12.1655 Ahg488402 longifolia1
13.7477 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
14.5602 Ahg485285 IQ-domain 21
15.0997 Ahg477690 Li-tolerant lipase 1
15.8745 Ahg494383 GDSL-like Lipase/Acylhydrolase superfamily protein
16.2481 Ahg475879 Pectate lyase family protein
17.8885 Ahg487523 Eukaryotic aspartyl protease family protein
18.5472 Ahg487827 Leucine-rich receptor-like protein kinase family protein
18.5472 Ahg490872 arabinogalactan protein 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression