Detail



ID : Ahg487328

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487328|fgenesh2_kg.6__462__AT5G05350.1
Sequence
TCTTCTCTAC CAAAAACTTT TTCTTCTTCA TTTTTTTTCG ATGTCTCTCA TCAGTTACCA ATCACAATCT CTTGCTTTAA ATTGAGTGTA ATTCTCCACT GAATTCAACT TTAGTTCGTC TCTTTCCTTC TGGGTTTCTC TGCAATTCCA ATTCTGGGCA TGTAATTCGA AGATTTTTCA ATCTTCTTTT GTCAAAGTTG AAGACTTTGT TCGTTTTGAA TCCGTCCGCT AGTAGAATCT TCTTCTTTGA ATCGCTTTCA TATCTCTGCT TTACGGGTTT TCACACTTTT GCCAGCAATG TCTAAGCTTC CAAGCACATG CCTTTGACTA ACTTTTCCCG GTAAAGGATT TGCTTTTACT TCTTTTTTCC TGGCACGAGA AAATGGGCTC AACTGATGAG GTTGAGAAAT CTAAGACTAG GGTTTCATGT CCTCCTGCTC TCTCAACATC TCATAAGATT CTTATCAGTG AAGAGAAACC TAGGAGATGG TCGGAGAGTT CGTTGCCTGA TGTCTCTAAT AGGATTAAGC TTTTGAAATT TGGTTCCGCT TCTGCTAGAT TCAAGAGAAT GGCAGAGGAA AGAGATGAGG TTTCACGCTC TGTTAACAGC TCAAGCAGCC ACAATTTCCA GGAAAGAATC AGTGTGGTGT TTTCCCGGAA AATTGAGTGA GCTTGCTTGA TGAAAATGGG TAAGCAATGG CTACAAAACC CGTTGAACAT GGTTCTTTTC TTGTGGATAC TTGTGGTTGC TGTCTCTGGT GCGATTCTGT TCATGGTTAT GACCGGCATG TTGAACCATG CTTTGCCCAA GAAATCACAG AGAGATGTTT GGTTTGAAGT TAACAATCAA ATCCTCAACG CTATGTTTAC TCTCATGTGT TTGTATCAAC ACCCGAAACG GTTTTACCAC CTTGTGCTTC TCTGTAGATG GAGGCAAGAC GATGTTACAA CGCTTAGGAA GATTTACTGC GAGAACGGGA CTTACAAGCC AAACGAATGG ATCCACATGA TGGTTGTTGT TCTTTTGCTT CACTTGAACT GTTTTGCTCA GTATGCGCTT TGCGGTCTTA ACTTAGGCTA TAGAAGATCC GAGAGACCTG CAATTGGTGT AGCTATATGT ATATCTATTG CAATAGCAGC TCCTGCGAGT GCGGGTTTGT ACACTATTCT TAGTCCACTT GGGAAAGATT ATGATCCTCA AGGAGATGAG GAGAATCAAG TGGAGCCTGT GGAAGAAGGA TCCGTTACTA ATCACAAGTT ATCTCTTGAA AGGAGATATT CATTTGCTTC TGCAGATGTG AGTAATCCTG AATGGAGAGG TGGAGTTCTT GATATATGGG AAGATATTTC ATTGGCTTAT CTCTCTCTGT TCTGCACTTT CTGTGTGTTT GGTTGGAACA TGGAGAGGAT TGGGTTTGGG AACATGTATG TGCACATTGC GACTTTTATT CTCTTCTGTT TGGCTCCTTT CTTTATATTC AACTTGGCTG CTATAAACAT CGATAACGAG ATGGTAAGGG AAGCACTTGG ATATACCGGA ATTGTGCTTT GCTTGTTTGG TTTGCTCTAT GGTGGTTTTT GGAGAATGCA GATGAGGAAA AGATTCAAGT TGCCGGGCTA TAACTTCTGT TGCAGGAGAC CTGCGATTGC TGATTGTACA CTCTGGTTAT TCTGTTGCTG GTGCTCTTTA GCTCAAGAAG TCCGGACCGC CAATTCTTAT GAAATAGTGG AGGATAAATT CTGCAAAAGA AGTGAAGAAA ATAGTAAGAT TGATGATGAG GTTGTGGTAT CTTCATTACC TCGTGAAGAC GGTGTGTTTG ATCCGAGTTG CTCGCCTAAG AAGATGACCA CGGCGATAGC TAGCTCGTCT CTTAGCCCGA GCAGACAGAA AGATGAAACT TGCTTGGGAG ATAAAAGTGA TGAAGCTCTA AGTCCACCTT CTCCTCCATT CATACACAGA AGCTAG 
Length1966
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1874271.. 1876263
Download Sequence
A.thaliana
AGI-codeAT5G05350.1
DescriptionPLAC8 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
32.619 Ahg914792
52.7257 Ahg895646
65.6658 Ahg930642
71.5122 Ahg899542
83.006 Ahg915426 Disease resistance protein (TIR-NBS-LRR class) family
98.0663 Ahg928790 Transcription elongation factor (TFIIS) family protein
98.4987 Ahg930229
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression