Detail



ID : Ahg487444

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487444|fgenesh2_kg.6__578__AT5G06350.1
Sequence
ATGGTTCGCT CCAAGGCTCC TGCAAAGAAG CAGCAAAAGA AAGGAATTGA TTTCAAGAAA ATTAAGAGAA AGCTCGGGAG AAAATTACCT CCACCGAATA ATGCAACTAA CACTGAGATT AAATCCAAAG CAATTATACT TCCTGAGCAA AGTGTGGCTG CTGAAAAGAG TGGCTTCGCT ACAAGTAAGA AAGGCTTAAC CTTGAAGGAG CTTCTGCAAC AAACTCGTCA TCACAATGCT AAAGTTCGCA AAGATGCATT ATATGGTATC AAAGACCTTT TTAAGAATCA TCCAGAAGAG CTGCAGTCAC ATAAATATGC TATCATACAG AAACTCAGGG AACGCATTAG TGATGATGAT AATCTAGTGA GAGATGCTTT TTATCAACTA TTTAAAACTG ACATCTTTCC TGCTTGTAAA GAGGATAACC AGGGCCCTAT GGTGTCACTT TTGATGCCAT ACATATTTAG CGCTATGGCT AGTTCAGTTA TTGATGTTCG TTTGATGGCT TTCAAATTTT TCCACCTTGT TGTGGAGTAC TACCCGCCTA CCTTTTCCTT GGATGCTGAA AAGATTCTCG AAAACTACAA AGATATTATA CAGAAAAATC ATTTTTATGT GCAAGATAAA AACAAGCTAA AGGTAGCTCT TTCTGGGTTG GCACATTGCC TCTCGCTGTT GCCATGTGAT GAAAGCGACA CCGAATCACA AAAAAAGGGA CCTTCACAGA ATGAAACACT ACTCGCCTAT GAGCAAGATG CTGCAAAAGA TTGTGTTATT TACAGTATTC TGACCAAGTT TCTACGGGTT CTTACAGGTT TTGCCCATGT CTGTGGGAGA TTGAAGGAGA TTGTTGGTGT CTTAATCAAT TGTTTCCAGG ATTTCATTCC ATTGATTCAT GCTCCGCGAG GATTCGATGC AGATTCATTT GATTGCATAC ACCATCTATT TCGCAGCATA GGTATTGCAA TCAAGTTTTC CATTCGTAGG CACATGCAAA GACAGACTGC ATGGCAACCT GCATCTGAAG AAGTTACTCT GATGATATTG GATCAGGACA TTGCATCAAT ACTGTTAAAA AAATTACTTG GTTCATTTCC TCTCAATCCA GAAAACAATC TTTATGGAAA GGGTGATGAA AGGTACTTTA CACTCAACAG TGTATTGACA GAAATCTTTT TGGAAGTAAG TGAATGGAGC CAACTTCCTA CTGATCTTTC CAATAGATTT CTGGAATTTA TTGAGAATAC ACTACTAGGC AAGATCACCA GGAGCATTAG GCTTAGTAAA GATATTCACG AAAAGACTTT ACTTACACTC TTGCCCTTTG TTCCAAAACT TATTCTGAGG GTGGACCGTG ATTGGAGAGA TAATCTTCTG CAGGCATTTA CTATTGCCTT CAGCGATTGC AAACCAGAGT CTGAACTCAA ATTAGCCTGC ATTTCAATTG TTAGAGACAT GATTATCCCT AATGGAGATA TCCTCTTTCC CAATGCAAGT GATCCAACGG TAAATAACTA CCAGGTGGCT TGGGTCAACA AACTTCCATC ACTGCTTAAT CAGTTGGGTG ATAAGCATCC CGTATCTACC CAGGTTGTTT TGCAACTCTT ACTCGACCTT GGGCGAGTTG GGTGTCTGAA TACTTCCCCC ACATGTGAAG ATGACATCAG AAACTTCTTC AGCCTTTGTC AGGGAGAAGG TGATGTGCCC GGTGGACCTT TTGCGAGTCT CCCTCGGGAA TCCCAAGAAC TGGCTCTCTG TTTCCTTTAC TACTTCACCA CAGACAAATT CAGCTCCCCT ATGATGAAAG CAATAGTTTC ATGCTGTTTA TATCCACAAC TTGAACCAGC TGTGTTGTAT CGGATAGTGG AAATTCTTCA CACTGCCTAT AGAGCTGGAT ATATCCAGAT TACAGATCAT TTTAGCTTTC TTATCACCTT AATTGCACGT TTCAAAGTTG CCCCAGAGAA ACTTCAGTCA CCGATAGAGT GTAATGAGCG GGAGACATAT TGTGGCACAT TTAAAGAAGT TACAAAGCTT GTGTGCTCAT GTTTGTCAGA AATGGGTGAT AGTTCTCTTG TCCTTCAGAT TGTAGAGAAA GTTTTACTCG AACAAATAAT TTTGAAGCCT GCTTTGGACA ATGGGTGTGC CATACTCAGG ATGATCTGCG TGTTGGACTC TACCCCTATC AGACTTTCTG AAAGGAGTGT AACCACTCTA AGTGAGTTCT TACCGGGATA TATGATCGAC ATAGTCAATT GTATACCAGA AGATAAGGAG AACTCTTACC TTTACATACA AACATGTCTC TACTATTTAG TACCTTGCTA TTTCTTGTTC AATCGGAGCT CCAAACTCAC AGAGCAGGTT CTGATAAGAA TGCGATTAAT GATTAGTGAA AACACAAATG CGCTAGAATT GGTACAAGAC AGGGAGAGTG GTCGAAACTC ATTGAATTTG ATACAATGCA TTATCTCTGT GATCCTGCTG ATGCACAATG ACGTCAAAGT TAGGAAGATA ATATCATCAT TCAAGTCAGA GATCGATTTG ATTCTGCAGA ACGTTATCAC ATTGCAGTCC TCACGAAGCA CGAGCTTGAC TGTAGAAGGA AAGCATATGA TGAAAATTGC GGGAGAGCGA CTTAGGATTG CATCCAAAAG CTTACTCGCG TAATAAAGTT CTACAACTGT AACATAAAAA GATTTGTGCT CTCTTTACAA ATGATGCAAA AGATATGACT ATTCTTGGTT GGTTTGAGAA AGAACCAATT TTGATGGCAA TTATGTAGAA TTTTGGTTTA 
Length2800
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2301628.. 2307184
Download Sequence
A.thaliana
AGI-codeAT5G06350.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.8661 Ahg316473 UDP-Glycosyltransferase superfamily protein
15.8114 Ahg485540 calcium-dependent protein kinase 13
15.843 Ahg924573 Ribosomal RNA processing Brix domain protein
17.3205 Ahg489823 RAB GTPase homolog G3A
24 Ahg489548 Calcineurin-like metallo-phosphoesterase superfamily protein
25.0599 Ahg950538 myb-like HTH transcriptional regulator family protein
26.1534 Ahg487115 Histidyl-tRNA synthetase 1
26.3249 Ahg486948 carboxyl-terminal domain (ctd) phosphatase-like 2
26.9258 Ahg476560 glycine-rich RNA-binding protein 5
28.4605 Ahg484092 microtubule-associated proteins 70-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression