| Annotation |
|---|
| Description | jgi|Araly1|486948|fgenesh2_kg.6__82__AT5G01270.1 |
| Sequence |
AAACCCTCTT TAGCGGAGAG AAATCACAAA GAAAAGTAGC GAAATTGAAT CTGCAGATTT TCTCACGCAT TTTCCCAGAA ACTGTTATCT TCACTACCTG ATTCGTTCTT CAGAAGTCTG AATTGAACGA ATTTACGATG AGTCGTTTAG GTCATAAATC CGTGGTTTAT CACGGAGATT TGCGTTTGGG GGAACTTGAT GTGAACCATG TATCTTCAAG TCATGAATTT CGATTCCCGA ACGATGAGAT TCGAATCCAC CATCTATCTC CGGCTGGTGA GAGATGTCCT CCGCTCGCGA TTCTTCAGAC GATTGCTTCT TTTGCCGTTA GATGCAAGCT TGAGTCATCG GCTCCGGTCA AACCTCAAGA GTTAATGCAT CTACACGCAG TCTGTTTCCA TGAATTGAAG ACTGCTGTGG TTTTGCTCGG AGATGAGGAG ATTCATTTAG TGGCGATGCC GAGTAAGGAG AAGAAGTTCC CGTGTTTTTG GTGTTTTTCG GTTCCTTCAG GTCTTTATGA TTCCTGTTTA AGGATGCTTA ATACTCGGTG TTTGTCAATT GTGTTTGATC TGGATGAGAC TTTGATTGTT GCAAATACCA TGAAGTCATT TGAGGATAGA ATCGAGGCTC TTAAATCTTG GATTTCACGA GAGATGGATC CTGTGAGGAT TAATGGAATG TCAGCAGAAC TTAAAAGGTA TATGGATGAT AGGATGCTGC TGAAGCAGTA TATTGATAAT GACTATGCAT TTGATAACGG AGTTTTGTTA AAGGCTCAAC CTGAGGAGGT CCGCCCAACT TCTGATGGAC TCGAGAAAGT TTATAGACCC GTGATTAGAT TGCCGGAAAA GAATACTGTG CTTACTCGAA TTAATCCAGA GATCCGTGAC ACTAGTGTGC TTGTAAAACT GAGACCAGCG TGGGAGGAGT TGAGAAGTTA TTTGACAGCC AAAACTAGGA AACGTTTTGA AGTTTACGTT TGTACCATGG CTGAAAGGGA TTATGCTCTG GAAATGTGGA GACTACTTGA TCCTGAAGCA CACTTGATAA GTCTCAAGGA GCTTCGAGAT CGTATTGTCT GCGTTAAACC AGACGCCAAG AAATCGTTGT TAAGTGTTTT CAATGGTGGC ATATGCCACC CGAAAATGGC AATGGTCATT GATGACCGTA TTAAGGTTTG GGAGGACAAG GATCAACCAC GGGTTCATGT TGTTCCTGCA TATCTTCCTT ATTATGCTCC ACAAGCAGAG GCATCCCTTC TCGTTCCAAT TCTCTGCGTA GCAAGAAATG TTGCTTGCAA TGTCAGAGGT TACTTTTTCA AGGAATTTGA TGAGAGTTTA ATGAGTAGTA TATCTTTGGT TTACTATGAA GATGATGTGG AAAATTTACC TCCATCACCA GATGTGAGCA ACTATGTCGT TATAGAGGAT CCTGGCTTTG CCTCAAATGG AAACATAAAT GCTCCTCCAA TGACCGAAGG AATGTGTGGG GGTGAAGTGG AACGCAGACT AAACCAATCG GCTGCAGCTG ATCATTCTAC TCTTCCTGCA ACAAGTAACG CTGAGCAGAA ACCTGAAACC CCTAAGCCGC AGATAGCAGT TATACCAAAT AACGCAAGCA CGGCAACTGC AGCAGCACTG TTACCTTCGC ATAAACCTAG TTTGCTTGGA GCTCCTAGAC GGGATGGCGT CACTTTTTCT GATGGTGGAA GACCCCTTAT GATGAGGCCT GGTGTAGATA TAAGGAACCA AAACTTTAAT CAACCGCCCA TTCTGGCTAA AATTCCTATG CAGCCACCTT CCTCTTCTAT GCATTCTCAG GGTGGTTGGT TGGTAGATGA TGAGAATAGA CCATCTTTTC CTGGTCGACC TTCAGGAATT TATCCAAGTC AATTTCCTCA TGGAATACCA GGTTATGCTC CTGTTGGTTC ATTCGCACAC CCATCCCACC TGAGGAGTGA AGAGGTATCA ATGGATGATG ACCTGAAAAG GCAAAATCTT TCACGTCAAA CAACAGAAGG TGGATTATCC CAGAATCATT TGGTGTCAAA TGGTAGAGAA CATCATACAG ATGGTGGAAA GAGTAATGGC GGGCAATCTC ATTTATTTGT GAGTGCACTA CAAGAAATTG GAAGAAGATG TGGTTCAAAG GTGGAGTATA GGACTGTGAT AAGTACCAAC AAAGAGTTAC AGTTTTCAGT TGAGGTTTTG TTCACGGGTG AGAAGATAGG CATTGGGATG GGAAAAACTA AGAAAGATGC ACATCAACAA GCGGCCGAGA ATGCTCTTCG AAGTTTGGCT GAAAATTATG TTGCACATGT GGCACCTCTA TCTAGAGAAA CAGCGAAAGA TCCGGAAAAT GATAATGGAT TTTTGTGGGA AAGCAGTGAA GATGGATCAA ACAAAGGACT TGTAGAGGAA GCACCTAAAG AAAACATTTC AGAGTTGTGA GTTTTGCAGA AATGCAAAAT TTAGGTTGAA AGAGAGAGAG ATGAGATGTG GGGAAGAAGA CAAAAGGTAA ATATTCCTTA CCAATGAGAA ACCAAAATAA GCGAAGATCA AAAAAGGTAA CAAAGTGTCT CAAATAAGAG ACTTTTTGAT TAAAAGCTAG CCTATTCCCT TAGGGAGCTA GTCTCATGAC TCTTGTTGTT TTGGTTTCTA TAGAGTTTTG AGAAAGTGAG TATGAAACCT TGCACCCAAG GCTCCACCCA CCTGAATTAG GCTTTGTGTT ATGTATAGTG ATTGTATATT TTTCGTCTA |
| Length | 2759 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 325669.. 330018 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G01270.2 |
| Description | carboxyl-terminal domain (ctd) phosphatase-like 2 |
| TAIR curator summary | Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses. |
| Alias | [ATCPL2][CPL2][carboxyl-terminal domain (ctd) phosphatase-like 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.9444 |
Ahg940820 | sulfate transporter 4.1 |
| 24.0832 |
Ahg473916 | peroxin 11A |
| 26.3249 |
Ahg487444 | ARM repeat superfamily protein |
| 26.6458 |
Ahg489755 | MAPK/ERK kinase kinase 1 |
| 32.1714 |
Ahg474357 | Coatomer, beta' subunit |
| 32.7261 |
Ahg477479 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 33.3467 |
Ahg473276 | D111/G-patch domain-containing protein |
| 34.8712 |
Ahg486936 | HEAT repeat-containing protein |
| 54.9909 |
Ahg487853 | cyclin-dependent kinase C;1 |
| 61.0164 |
Ahg484121 | sodium proton exchanger, putative (NHX7) (SOS1) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|