Detail



ID : Ahg487465

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487465|fgenesh2_kg.6__599__AT5G06550.1
Sequence
GTCAAACATG CCAAAGTACA AGAATCTGTT GCTAACCTCG AAGCGACGTA AATCGAAATT CAAAAAACAA AAGCTACATC AGCATGAACC TGAGGCTCTG TTTCCAGAGA AGGAGGTAGA AGAGGAAGAT GAAGATGAAG GAGGCTTCAA GCTGAAAATG GCAGCTCCTT CTCAAGAGCA TGGAGTTCAA CCTCTCGGAA ACCTGTATTT CAATCCTGGT TCGGTCAATG TGCGAAACAC TGGATTAGGT AATCTCCAGA TACTCTCGGA TGAGCTCGTT TTGGATATTC TAGGTCTTCT TGGCGCGACT CATTTGGGTA TTTTGGCTAC TGTAACCAAA TCTTTCTATA TTTTTGCCAA TCATGAGCCT CTCTGGAGAA ATCTTGTGTT GGAAGAGCTA AAAGGAGAGT TTTTGTTTAA TGGGTCGTGG AAATCTACCT ATGTAGCTGC TTACCACCCG AAATTCAAGT TTTCTGGAGA TAGTGAATCG AATTTGAAGA TTATAGATTT CTATTCTGAT TATTTGTTTC AGAGCTGGTT GTGTGCGAAT CTTGAAATGA AACCGAAATG GCTTAGAAGA GACAATATCA CACGGGTGAG AGGCATTTCT GTTGAAGAAT TCATTACCAA GTTTGAGGAG CCGAATAAGC CTGTTTTGTT GGAGGGGTGT TTGGATGGTT GGCCTGCTAT TCAGAAATGG TCAAGAGATT ATTTGATTAA GGTTGTTGGG GATGTCGAAT TTGCGGTTGG TCCAGTTGAA ATGAAGCTCG AGAAATATTT TAGGTATTCT GATGGAGCTA GGGAAGAAAG GCCTTTGTAT TTGTTTGATC CAAAGTTTGC AGAGAAAGTT CCGGTTTTGG ATTCGGAGTA TGATGTTCCT GTCTATTTCA GAGAGGATTT ATTTGGTGTT TTAGGAAACG AACGACCTGA TTATAGATGG ATCATAATTG GCCCAGCCGG ATCAGGATCG TCTTTCCACA TTGATCCTAA CTCAACATCC GCTTGGAATG CGGTGATTAC AGGGTCGAAA AAATGGGTTC TGTTCCCACC GGATGTGGTT CCTCCGGGTG TGCATCCAAG TCCTGATGGA GCAGAAGTGG CCTGTCCTGT CTCCATAATA GAGTGGTTCA TGAACTTTTA TGATGATACT AAGGATTGGG AGAAGAAACC TATTGAGTGT ATATGCAAAG CTGGGGAGGT GATGTTTGTA CCTAATGGAT GGTGGCATCT GGTGATCAAC CTGGAGGAAT CGATTGCTAT TACTCAGAAT TATGCTAGCA GGAGGAATTT GTTGAATGTG TTAGAATTTC TGAAGAAACC GAATGCTAAA GAGCTTGTCT CCGGAACAAC TGACAGAGAG AATTTACATG ACAAATTCAA GAAGGCCATT GAAGGAGCTT ACCCAGGAAC TATCCAAGAG TTAGAAAAGA AAGCAGAAGA AGCGAAAAGA GCGGAAGAAC AAAGAGTTTC TTTCTGGGAC TCTGCCAAAG CTGATGCTTT CAAGTTTTCT TTCTAAAGAC AATCAATACA TCATCATAAA TTTTCAATTT TGTAAGATCT TCTAGATCCT TTAACAAATG CAGATGGAGG AAATTGTTAC CCTTATATTT ATGCTCTTTG CTAC 
Length1624
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2372579.. 2374575
Download Sequence
A.thaliana
AGI-codeAT5G06550.1
Description
TAIR curator summary
Alias[JMJ22][Jumonji domain-containing protein 22]
Gene coexpression
MR
MR Locus Description
21.3307 Ahg492264 fibrillarin 2
26.1534 Ahg903674 3'-5'-exoribonuclease family protein
29.2404 Ahg490127 transducin family protein / WD-40 repeat family protein
33.2265 Ahg477746 40s ribosomal protein SA B
37.8418 Ahg477959 ARM repeat superfamily protein
50.3786 Ahg489346 tRNA (guanine-N-7) methyltransferase
52.4786 Ahg487806 Putative endonuclease or glycosyl hydrolase
53.5724 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
61.1882 Ahg894080 RNA cyclase family protein
61.9677 Ahg900568 60S acidic ribosomal protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression