Detail



ID : Ahg487806

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487806|fgenesh2_kg.6__940__AT5G09840.1
Sequence
CTCCGACCAT GAAATTTGGA TCTATACCAT CCAAATCCCT TCTCTTCCGC CTCTCTTCTT CCTCCGCAAC CCAATCTCCC CGTCGAACAA CTACCTTTCT CGTCACCAAC ATTCATTCCT CTCCATTCTC TACCACCACC GGCTCCGGCT CCAATTTCGT CTCCGGATCC AGCCACTCTC CTTCTCGTCG TCCTCAGCAA GACGAAGAAT CTCGATCCGT TAGGGTTTCG GTCTGGTGGG ACTTCCTGAG CTGTAACTTA CCTGTAGGTG TCAATGTCTT CAAAGTTGCA CAATCAATCA CCGCCGCTAT AAGAAATAGC GGAATCAAAG GTCCAATCAC AATCACAGCC TTCGGTGACG TTCTACAGCT CCCCAGATCA AACCAAGACG CTCTCTCCGC TACTGGAATC AGTCTCACTC ATGTTCCTCA AGGTGGTAAG AACAGTGCTG ATAGATCTTT GATCACAGAT CTTATGTGTT GGGTTTCTCA GAATCCACCA CCAGCTCATC TTTTGCTAAT CTCTAGCGAT AAAGAATTCG CAAGTGTGTT ACATAGATTG AGGATGAGCA ATTACAACAT TTTGCTTGTG AGTAAATCAT CTGCTCCTGG TGTTTTGTGT AGTGCTGCTT CGATTATGTG GGATTGGGAT GCTTTGATCA AAGGAGAGTG TGTTAGTGGT AAGCATTTTA ATCAGCCTCC TGATGGTCCT TATAACTCTT GGTATGGTCA CTATAGGATT CCTCTTCTTG ATCCATTTGC AATTGCTACC ACTACTGAGC AATCGTCTAG TGTGAAAATC GAAGAACTAT CCGAGTCTAG TTCGGAGTCT GTGAATTCGA ATGCTGTTAA CCTTCGTCCT ATTCCAAAAG AAGTTGTTGA CAAGATTCGT TTGATATTGA GTTTATATCC CAAGGGGGCA GCCATAACAG AACTACGTGC TGAGCTTATT AAGAGCAATT TAGCAATTGA TAAAGATTTC TATGGACATA AGAAGTTTTC GAAGTTTCTG CTATCCATGC CAGATATCTT ACGGGTTGCT ACAGCTAGTG ACGGCTTGTT TATTATTCAT GCTGTCACCG AAAAGAATCC TCCTATGCGA CTTGATTCTA GTCCTGGCTT GTCTACTGCT GTTGATCAGA AGATTAAAGA TAAGGAAACT GCTAATGCTC CATCGCCAAA ACTAATTAGC GATGTAGAAC TTGCTGCTGT AAGAAGAAGA GATGGCTCAG TTGGAAAGAA GCAGGACAAC GTAATGGAGA GTGACAAAAT TGTCAAAGAG GAATCATCAG AGAGTTCCCA AGAGGCAATT CTGGTCGGCC AGAAGGACGT TAAGGCAAAT GATAAATCCG TGGAGACGAA TCAAGTCGCT CTTGTTGCGT GGAGTGATTC GTCCATGGAA GATGGTTTTT TTCAGAAGCT AAAAAGACTA TGGTATGGTT CACCTGAGAT GAAATCAGAG CATCTCCCAG AAAATATGGA ATCAGAGCAT CTCCCAGAAA AGAAAAGTGT TTCTGGAAGT GGAGACAAAT ATAAAGGAGA TAAGGACTTA AAGTCATCGA TTCAGGGAAC TGATCCCATG TCTCGAACCT CACCTTCCTT CGTTGCTGAG TCTGTCGAGG GGGTAAAAGT AGGAGCTGCT GAAGTAGACA GTAAAGATAA AGATGCAAGT CCAGGCTTTT TAGGTCGCCT TTTGAATACT TTCAAGTTCT GGGGAAAGAA CACAGCCTGT AGCAAAGACT GTAGTGGGAA TCAGGAACTG GTCAGTGTTG ATTCTCAAGT ACGCGACATT TTTGAAAAAG AGTCTTTCTG GAATGATGTT GAATCTTTCA TCAATTCTCC AAGAGGCTTT GCTATAGTAT CTCATTCAAA GACAAGGGAG GTGATGGCTA AAAATCTGCA GGAAGAAGGG CCTTTGTGTC TCAGACTGCT CGATGAATCA ATCATGCTTC ATTTAGTTAC TTTACTAATA TCAGATAAGA AATGGATTGA AGAAACCCCC TCTTCTTCTC TACCATTCAG AATCATCAAA GGATCTAGCC CTGGCCACCG CCATCCTTCA AACGGTTTGA GCTCAATCTT CTCGGATTCT TCAAAATCAC AGTCGCAGAA ACAAAATGGG GAGAAAAGGG GAAAGAACGT TGCTCATGCT GGAGTTTCTG TTGGTTCTAT GGACCGGAAA CAGCTGGAAA GATACAAAAG TAATGCAATA GCGGATTGTC AGAAGCTGAT AAAGAAGATA ACAGAGGAAC ACCCTGAAGG TTATAGCCTG ATTCGTTTCA GGAAAGAATT CTTAGAGGAA TATGGGTACC ATTTAGCGGT TGACAAGCTT GGTTACGAAA ACCTACAGTC TCTAATTCGA GTCATGCATG GAGTGAGAAT AGCATCTGGA TACATCCTTC CTTCAACTCC TTTACCAAAT GCCAAGTCAA AAGAAGATGA TTCGGACTTG ACATTCGAAG AACTCGGTCC AGTTTCTGAT GCAACAACTA CGCACCCGAC GACCAAAAAG CTTGCAGTAT ATGAACCATC TCTCTCCGAG GATGAAGAAG ATTCTGGTTC AGAGAGGGAT AACCCGGAGA AGAAGAAGCA AGAGATGATG AGTAGAGAAG GTAAAGAGAG CTCGTTATTG CAAATTCTGG ATTCTTATTA CACAAACAAA GATGGAGAAT TTAAGAAGGA GAAACCAGAG GAGAAGCTTG TAAGCAACGG TAGAAAGCAA AAGCCTACAA AGACATATTC TTTTGTTAAA GATTCAGAAG TCTAG 
Length2765
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3727641.. 3730648
Download Sequence
A.thaliana
AGI-codeAT5G09840.1
DescriptionPutative endonuclease or glycosyl hydrolase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg890991 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
3.74166 Ahg486453 Dihydrodipicolinate reductase, bacterial/plant
6.48074 Ahg325654 transducin family protein / WD-40 repeat family protein
6.63325 Ahg485301 Transcription factor IIIC, subunit 5
8.06226 Ahg890992 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
9 Ahg487399 Transducin/WD40 repeat-like superfamily protein
9.48683 Ahg948807 Helicase protein with RING/U-box domain
9.59166 Ahg928901 Galactose oxidase/kelch repeat superfamily protein
13.9284 Ahg489959 Calcineurin-like metallo-phosphoesterase superfamily protein
15.4919 Ahg354097
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression