| Annotation |
|---|
| Description | jgi|Araly1|487481|fgenesh2_kg.6__615__AT5G06700.1 |
| Sequence |
ACACCACATT CCCCACTACT AGTGCCCCCT CCACCTCTCC GTCTATGGCG TCAGACGCCG TTAAGTATAT GCCAATCCAC GGCGGAGGAA CAACAACAAC AACAACCGCC GCCGACATCA AGAGCTTCTT CTCTGCTTTG AAACCCAAAA AAACCTCAAC TTTCGCTTAC GCTTTTGTCA TAACCTTCGT CTCTTTTACT CTGTTTTTTG CTTTTAGTCC TTCTCCAAAC TCTTCTTCTC CTTGGTTCTC TAACATCTTC ACTTCCTCCT CCACAACCAC AACTTCGGTA TCAGACAACA CTTCCGGATC TCAGTTCTCT TCAATTTTCT CTTATATTCT TCCCAATGTC ACTACAACCA AACCCACCAA TAGATCCAGT GACGCTACAG ATCCTATCTC TGTTAACGCC ACTTCTCCGT CTCTCAATTC GAATTCCAAA AACGGTACTT TACAAGCACC GGCGCCGGAA ACTCATACTC CGATTGCTAA AAACACAACC TTTGAGTCTC CGATCGTAAA CGGAACCAAC CCAGTTGCAA AGAACAACAC TTTATCTCAT CCTCTGCTTT CAGACAAATC TTCAACGACG GGATCGAATA ATCAGTCACG GACCACCAGC GATACTGAAA CCGTGAAGAG AAACCAGACG ACAGCTCCGG TGCCGTCAAA ATCACCGGTG TCGGTGGATC TGAAGGCCAA TTCCAGTTCC AATTCATCAA CTGCTTCTTC TACACCGGAA AAGCAGACTA AAAGCGTTGA TTTGGTTTCG TCGGTGAAGC AAGAGATCGA GAAATGGAGT GAATCTCTGA AAAATTGCGA GTTCTTCGAC GGTGAGTGGA TCAAAGATGA TTCGTACCCG CTTTATAAAC CCGGTTCGTG TAAGCTTATC GATGAACAGT TCAATTGTAT TTCAAACGGA AGACCCGACA AAGATTTCCA GAAATTGAAG TGGAAACCTA AGAAATGTAG TTTACCAAGG TTAAATGGAG CTATTTTGCT GGAGATGCTT AGAGGAAGAA GACTAGTCTT TGTGGGTGAT TCTCTAAATA GGAACATGTG GGAATCACTG GTTTGTATTC TTAAAGGATC AGTGAAAGAT GAAACCAAAG TCTATGAGGC TAGAGGAAGA CATCATTTTC GTGGGGAGGC TGAGTACTCT TTCGTCTTCC AAGATTATAA CTGCACGGTG GAGTTCTTTG TTTCACCGTT CTTGGTTCAA GAATGGGAAA TTGTAGACAA GAAAGGAACA AAGAAGGAGA CTTTACGGCT GGATTTGGTT GGGAAGTCCT CTGAGCAGTA CAAGGGAGCG GATATTATTG TATTTAATAC CGGACATTGG TGGACTCACG AGAAAACATC TAAAGGGGAG GATTATTATC AAGAAGGAAG CAATGTTTAT CACGAACTCG CTGTTCTTGA AGCTTTTCGT AAAGCTTTGA CTACATGGGG TCGATGGGTC GAGAAGAATG TGAATCCTGC AAAGTCCCTC GTTTTCTTTC GGGGCTACTC CGCCTCCCAT TTCAGTGGTG GGCAATGGAA CTCAGGAGGA GCATGCGATA GCGAAACAGA ACCGATCAAG AATGATACAT ACCTAACCCC ATACCCGTCT AAAATGAAGG TGCTTGAGAA AGTGCTAAGA GGTATGAAAA CACCCGTCAC GTATCTAAAC ATCACGAGAT TAACGGACTA CAGGAAGGAC GGTCACCCAT CAGTATACCG GAAACACAGC TTATCGGAAA AAGAGAAAAA AACGCCTTTG CTGTACCAAG ACTGCAGCCA TTGGTGCCTC CCGGGAGTTC CCGACTCTTG GAATGAAATC CTCTACGCGG AGCTGATCGT CAAACTCAAT CAGGTCAGCC AAACACAACG TAAAACTTAA GGTTCTTCCA CCCCAATACT TGTTTGATCT CAACACTTTT ACTTTCTATT TTGATGGTAA TTGTTGATTA TAGAATGTGT AGAGTAAAAG ATCACCCGAT ATCTTTGTTA CCATTGGTTG TAAATGCTTT TGTCACGACG AATACTATAT TTAGCTCCAA AGAGAGGTTA CATATTCATA TTTATAATGG AATTGATTCA A |
| Length | 2081 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT5G06700.1 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes. |
| Alias | [TBR][TBR][TRICHOME BIREFRINGENCE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.69042 |
Ahg944104 | alpha/beta-Hydrolases superfamily protein |
| 8.12404 |
Ahg473059 | |
| 8.60233 |
Ahg473170 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 12.9615 |
Ahg491486 | cellulose synthase 1 |
| 18.8944 |
Ahg490712 | cellulose synthase A2 |
| 23.9165 |
Ahg471997 | white-brown complex homolog protein 11 |
| 28.4253 |
Ahg921841 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 |
| 34.322 |
Ahg945240 | YGGT family protein |
| 34.4674 |
Ahg495032 | glycosyl hydrolase 9A1 |
| 37.7492 |
Ahg900167 | 3-ketoacyl-CoA synthase 10 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|