Detail



ID : Ahg487526

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487526|fgenesh2_kg.6__660__AT5G07060.1
Sequence
ATGGCTCACA GGGATCATGG AGCCGATTTC CCAATCACCT GCGAATCTTG CTTCGGAGAC AATCCGTACG TGCGAATGAC CCGAGCGGAT TATGATAAGG AATGCAAGAT ATGTAGACGC CCTTTCACAG CTTTTAGGTG GCGACCAGGC CGGAATGCTA GATTCAAGAA AACCGAAATT TGTCAGACTT GCTGCAGGCT GAAAAATGTA TGCCAAGTCT GTCTTCTGGA TCTCGAGTTT GGTCTTCCTG TTCAGGTCAG AGACACCGCA CTCCAAATTA ATAGTACTCA TTACTCTATC CCAGAGAGCC ATGTCAACAG AGAGTACTTT GCTGAAGAGC ACGACAGGAA GACTAGAGCT GGACTGGATT ATGAATCTTC ATTTGGGAAG ATGCTACCTA ATGTACTATT TCAAATCTTC AAAGAACAAC ACCATACTAT GATAGGAACC GGCCACGAGT TTGTAGTTTC TACACCATTG ATGCCCGAAA CAGGAGAGCT ATCCCAGCAA AACATAAAAG ATCGTTATTA TGGTGTAAAT GATCCAGTCG CGAAGAAGTT ACATGGAAAA GCTGGTGAGA TGGGCACTTT GGAACCACCA GAGGATGAAA GCATCAAAAC GCTTTATGTC CGTGGACTTA ACTCGAGTAT CCTCGAACAA GACATACATG ACAAACTCTA CGCTTATGGA GCTATCAGAG TCTTTGCCGA GAAAGGCTAT GCGTCCCCAA ACCTGATCAA AGTGGTTCAA ACCAACAGCA ACAGGGCAGT GTGGCTCATA GTGCAGCAGT ACTATACGCA CCCACCACCA CCTAACCAAT ACAGACCTTA TGACCCATCA ATGGACCCGC AGAGAATGGG TGCAGTCATT TCAACCCAAG AGGGTGGTGG TTCAAGCACC AGTGAGAACA ACGGAGCTTC TTCTTCTTAC CCGATGCCTC CACACCAGCC AAACCTGCCA CCACCATATG GATATATGAC ATGA 
Length984
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2588147.. 2589714
Download Sequence
A.thaliana
AGI-codeAT5G07060.1
DescriptionCCCH-type zinc fingerfamily protein with RNA-binding domain
TAIR curator summary
Alias[MAC5C][MOS4-associated complex subunit 5C]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg484315
10.583 Ahg942773 TBP-associated factor 14
14.1421 Ahg908321 Transmembrane amino acid transporter family protein
27.4955 Ahg949734 K-box region and MADS-box transcription factor family protein
37.2827 Ahg479617
46.4327 Ahg482128 Protein of unknown function (DUF1264)
54.7175 Ahg493004 alpha/beta-Hydrolases superfamily protein
58.9406 Ahg316004 Protein of unknown function (DUF1163)
64.2495 Ahg327156 glycosyl hydrolase 9B14
78.0641 Ahg470414 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression