Detail



ID : Ahg487666

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487666|fgenesh2_kg.6__800__AT5G08335.1
Sequence
TCCTGCAACG TTTCTTCTCA TCGATTTTGA CCGGAAGCTC CATGAATCAA ACAAGACTTT CAAAAGTAAT TCCGTCACTA TAGCAAGCAA AGAATAAAGG GTAAAGGTGT AAACTTTGCT TCTCTCCTCC AAAGTCCACG CGATTCTCAC TGCCAGCCTC TGTGAAATTT CCAGACTTTC TCGCATTTTC CCTCGTATCA GCCGTCAATT TCAAGTGGGG CTGAGTAATC TTGTGAAGAA TCAATGACAG AGATATTTAG TGACACCGGG TTCAGACAGT TAACTCAAAT GTTCCTGGCG ATAATCTTCT TCCACACATC GGAATACATT CTCGCCGTAG CCATTCATGG AGCATCGAGA GTAACTTTAA GCTCACTCTT AATCAGCAAA CACTATGCTT TAGCAATGCT AATCTCGGTC CTCGAGTACA TAACCGAGAT TGTTTTCTTC CCGGGGCTGA AACAACACTG GTGGATCAGC AATTTCGGTC TTATAATGAT CATACTTGGA GAAATCATCC GAAAAATCGC GATAATCACA GCAGGTAGAT CGTTCACACA CCTTATAAAG ATTCGCCGGG AGGAGCATCA TAGGCTTGTG ACGGAAGGAG TGTATCAAAT CATGAGGCAT CCGAGTTACT CCGGGTTTCT CATTTGGTCT GTGGGAACCC AAGTAATGCT GTGTAATCCA ATTTCAGCCG TTGCGTTTGC GGTTGTGGTG TGGCGGTTCT TTGCAGAGAG AATACCTTAT GAGGAGCATT ACTTGAAGCA ATTTTTTGGG AGACAGTATG TGGAGTATGC GCAGAGAGTT CCTTCTGGTG TTCCTTTTGT AAACTGATCC TTAGATCAAT TGTGAACATA TACGAGAATG GTTTAATTAC TTTTTACATA GAAAGTTATG AAAGAGATAT TGTTACTCAT GT 
Length922
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3138843.. 3140304
Download Sequence
A.thaliana
AGI-codeAT5G08335.1
DescriptionIsoprenylcysteine carboxyl methyltransferase (ICMT) family
TAIR curator summaryEncodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.
Alias[ATICMTB][ATSTE14B][ICMTB][ARABIDOPSIS THALIANA ISOPRENYL CYSTEINE METHYLTRANSFERASE B][ISOPRENYL CYSTEINE METHYLTRANSFERASE B]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg477177
27.1662 Ahg928205 germin-like protein 8
37.3363 Ahg494216
44.0908 Ahg492401 phosphoglucan, water dikinase
47.1805 Ahg474695 isocitrate dehydrogenase
62.1369 Ahg894926
63.6239 Ahg930999 Ribosomal protein S12/S23 family protein
65.2304 Ahg350042 glucuronidase 2
71.7147 Ahg924476
77.4209 Ahg487156 TRF-like 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression