Detail



ID : Ahg487687

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487687|fgenesh2_kg.6__821__AT5G08490.1
Sequence
ATGGTACCTT TACGGCAATT TGTTCAGAAT TTCAGACTTT TGTCTGGTTT TGGAACTGAT CACAGGGTTT TTTTGGATGT TGTCAAAGCT TGTGCTTCAG TGTCTGAGCT CACATCAGGG AGGGCTCTGC ACGGTTGCGT GTTCAAGCTT GGTCATATAG CCTGCACTGA GGTCTCGAAG TCAGTTCTTA ACATGTATGC GAAATGCAGG AGAATGGATG ATTGCCAGAA GATGTTTAGG CAAATGGACA GTGTTGATCC TGTTGTTTGG AATATTGTTC TGACTGGACT TTCTGTTTCT TGTGGTCGTG AAACGATGAG GTTTTTCAAA GCAATGCACT TTGCAGATGA ACCTAAGCCC AGCTCCGTTA CCTTTGCGAT TCTTCTTCCT GTGTGTGTTC GCCTTGGGGA TTCATACAAT GGGAAAAGTA TGCATTCTTA TATTATTAAA ACCGGTTTAG AGAAAGATAC ACTTGTGGGG AATGCTTTGG TTTCCATGTA TGCCAAATTT GGGTATATTA TTCCTGATGC TTTTACTGCA TTTGATGATA TAGCTGACAA AGATGTTGTC TCATGGAATG CGATTATTGC TGGGTTTTCT GAGAATAAGA TGATGGCTGA TGCATTTAGA TCGTTTTGTC TAATGCTGAA AGAACCTACA GAGCCAAATT ATGCAACAAT TGCAAATGTT TTGCCAGTTT GCGCTTCCAT GGGCAAGAAC ATTGCATATC GAAGTGGGAG ACAGATTCAC AGTTATGTTG TGCAGAGATC TTGGTTGCAA ACCCATGTTT TTGTATGTAA TTCACTTGTG AGTTTCTATT TGAGAGTCGG AAGAATAGAA GAAGCAGCCT CATTGTTTAC GAGGATGGGT TCCAAAGATC TGGTTTCATG GAACGTTGTC ATAGCCGGTT ATGCATCAAA TCATGAGTGG CTTAAAGCAT TGCAGTTATT TCACAACTTG GTGCAAAAGG GGGATGTTTC TCTTGATTCA GTAACTATTC TCAGCATCCT TCCTGTCTGT GCGCAGTTAA CTGACTTGAC CTGTGGGAAA GAGATCCACA GTTATATTTT GCGCCATTCT TACCTTTTGG AGGATACATC AGTTGGTAAC GCTCTCATTA GTTTCTATGC AAGATTTGGT GACACGAGTG CAGCATATTG GGCCTTTTCA CTGATGTCCA TGAAGGATAT AATATCTTGG AATGCTATAC TTGATGCCTT TGCAGACAGT CCAAAGCAGT TTCAATTTTT GAATCTCTTG CACCACTTAT TTAACGAAGC AATCACTCTT GACTCTGTTA CTATTTTAAG CCTACTCAAG TTCTGCACAA ATGTACAGGG AATTGGTAAA GTAAAAGAAG TTCATGGGTA CTCAGTTAAG GCTGGTCTTT TACACAATGA AGAGGAACCC AAGCTTGGCA ATGCATTGCT TGATGCATAT GCCAAATGTG GTAATGTTGA ATACGCTCAT AAGATTTTTC AGGGTTTATC AGAGAGGAGA ACTTTGGTTA CCTATAACTC ATTGTTATCA GGATATGTTA ATAGTGGAAG TCATGATGAT GCTCAGATGC TGTTCAGTGA GATGTCTACT ACTGATCTGA CCACTTGGAG TTTGATGGTT CGTATCTATG CTGAAAGTTG TTTCCCTAAT GAAGCCATTG GTGTTTTCCG TGAGATTCAA GCTCGAGGAA TGAGGCCTAA CACTGTGACT ATAATGAATC TCCTTCCTGT TTGTGCGCAG CTAGCCTCTC TGCATCTAGT AAGACAATGT CATGGATATA TTATTAGAGG CAGACTTGGT GATATCCGCC TGAAGGGGAC TCTACTAGAT GTATATGCTA AATGTGGCAG CTTGAAGCAT GCATATTCTG TCTTCCAGTC AGATGCTCGT AGAGATCTGG TTATGTTCAC TGCTATGGTA GCTGGGTATG CTGTACATGG TAGGGGTAAG GAAGCACTTA TGATCTTCTC TCATATGATT GACTCAAACA TAAAGCCCGA TCATGTTTTC ATAACTACTC TGTTGACTGC ATGCTGTCAT GCGGGATTAA TACAGGATGG ATTGCAAATA TATGACTCAA TAAGGGCAGT TCACGGTATG AAACCTACAA TGGAACAATA TGCTTGTGCT GTAGATCTAC TTGCTCGAGG GGGTCGACTT GATGATGCAT ATTCTTTCAT CACACAGATG CCAGTTGAAC CCAATGCAAA TATATGGGGA ACACTGTTAA GGGCGTGTAC AACCTATAAT AGGATGGATC TGGGGCACTC AGTTGCAAAT CATCTTTTGC AAGCTGAATC TGACGACACC GGAAACCACG TTCTCATATC GAATATGTAT GCTGCAGATG CTAAATGGGA AGGCGTGATG GAGTTGAGAA ACCTAATGAA GAAAAAGGAA ATGAAAAAGC CAGCGGGATG TAGCTGGCTA GAAGTGGATG GGAAAAGGGA TGTTTTTGTG TCTGGAGATT GTTCTCACCC TCGTAGAGAC AGTATTTTTG ACTTAGTCAA TGCTTTATAT CTTCAGATGA AAGAGCCTGT GGTGTTTTAA 
Length2550
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3206478.. 3209027
Download Sequence
A.thaliana
AGI-codeAT5G08490.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[SLG1][SLOW GROWTH 1]
Gene coexpression
MR
MR Locus Description
1.73205 Virus3750
3.74166 Ahg932028
5.09902 Virus2062
8.94427 Ahg337384 Regulator of Vps4 activity in the MVB pathway protein
13.2665 Ahg935099 citrate synthase 3
14 Ahg894794
15.0997 Ahg889842
16.0624 Ahg887377 Glutamine amidotransferase type 1 family protein
20.3961 Ahg942249
26.8328 Ahg914953 guanosine nucleotide diphosphate dissociation inhibitor 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression