Detail



ID : Ahg487719

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487719|fgenesh2_kg.6__853__AT5G08750.3
Sequence
GATTCTCGCT TCTTACTACA TGTGTATCAA TCGATCTCTA CCCAGATTCT CCGGAGGAGC TTTGCGTCTT CTCGTATAGA TGCAGTGAAG GTCCTTTGTT AGATGGGAAA ACTTTTTCTG GAGTTGTCAA AAGAGAATCA GTTGGAGACT ACCAATTGCG GAGTCAGTGA TCACGGTTCT CCACCTATCA AGAACGAAGA ACATGAGGCA CCACGTTACA GTTCAGACAA AGACACGGGT TTACCAACTT GCCGTGTGTG CCAGTGTGCA GAATCCGATA GAAGAGGAGA TGCTGCTTTA GGGTTTTTGG GGATTACTCC TCCGGTTTCA GAACCTCGCA GAAGCAATGC GGGCGAAGAA ACCGTTGATC AGAAAAGCTC GGTTAACAAA TCTAGTGGAT TCATCGAACT AATAAGTCCT GATGGAGAGG TTTTCGTTTG TGCAAATGGC GATATAGAAA TGGGAGCGTG GCAACATCGA GATAAGTTGC TAGAACTCGG ATGTTCTTGC AAGAATGATC TTGCTTTGGT ACACTACGCT TGTGCATTGA AATGGTTCGT CAACCACGGA TCAACAGTTT GTGAGATATG TGGAAAAACC GCGGAGAATA TAAGAACAGT TGATTTCAAC AAAGTGGTTA TCGCTTTAAA AGATTACGCA GCGCTAAGAG AAAGAACAGC GGATGGAGAT CCAAATCCTG TCGCGGTTAA CAACAACACG AGTTCTTCAG GAATTGATCC TGATGCAGTT GCAGCCATTC GAAGGCAACG ACTTAGTGAG ATTTCGTTAT GGTTTGGTCC ACATTGTTCA AACAACAACA ATAGTAGTAA TTCCGGTGCT GCAGGGACGG CTTCTTCTCA GGTTACATCT GAACAACCTG TGGGTATAGT AAACTTTGAT ATCTTGCCTA TGGAAAGCCG TGCGACCAAA TGGGCGGTTG AAGGTACCGG AATACTACTT GCAACCGGAT TACTCACTGT TACTTTGGCA TGGCTCATTG CTCCTCGTGT CGGAAAGAGA ACTGCAAAGA GTGGACTACA CATACTTCTA GGTGGTCTCT GTGCTTTAAC AGTAGTCATC TTCTTCAGAT TCGTTGTGCT GACAAGAATC AGGTACGGAC CAGCACGTTA CTGGGCAATC TTGTTCGTCT TCTGGTTTCT TGTGTTTGGC ATTTGGGCTT CACGTTCACA CGCTTCTCAC TCCTCCACAT GATAAATTCT TCATCATCCT TTTTTTGGTC TCTGTCAATA TCGTTTACGT TATTCTCTTT CAAAACACAA AATGTACAAT TAATTACTCT TGTCAGAAAA AAAAAAAGG 
Length1319
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3508511.. 3510808
Download Sequence
A.thaliana
AGI-codeAT5G08750.3
DescriptionRING/FYVE/PHD zinc finger superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.3875 Ahg470281 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
14.4914 Ahg473822 Peptidase M20/M25/M40 family protein
17.4929 Ahg921521 5'-AMP-activated protein kinase-related
28.9137 Ahg354257 Tetratricopeptide repeat (TPR)-like superfamily protein
30.5123 Ahg330664 Calcium-dependent lipid-binding (CaLB domain) family protein
31.749 Ahg480964 XAP5 family protein
39.1918 Ahg317312
41.7373 Ahg319769 MAP kinase 7
48.1144 Ahg321144 Kinase-related protein of unknown function (DUF1296)
49.5984 Ahg485534 transmembrane protein G1P-related 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression