Detail



ID : Ahg487780

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487780|fgenesh2_kg.6__914__AT5G09640.1
Sequence
AAGGTTCTTC GTTGACATAC TATTCTCTGT TCAAGTGACA CTAAGAAACA GAGAAAATGA GAAACCTTAG CTTCATCGTC TTATTTCTAT TAAGCATCTT CTCTATTCAT CATTTTGTTG ATGCTTCTTT GCGTGTGAAG TATCTTCCTG GTTTTGAAGG TCCTCTTCCT TTTGAGCTCG AGACTGGATA TGTGAGTATT GGCGAATCTG GAGATGTTGA ACTCTTTTAC TACTTTGTGA AATCAGAGAG AAATCCAGAA AATGATCCTC TCATGATTTG GCTCACTGGT GGACCTGGCT GTAGCTCCAT CTGTGGATTG CTCTTCGCTA ACGGTCCTTT AGCTTTTAAA GGGGATGAGT ATAATGGAAC AGTTCCTCCT TTAGAGCTAA CATCTTTTTC ATGGACAAAG GTGGCTAACA TTTTATATGT GGAATCTCCT GCTGGCTCTG GATATTCTTA TGCTAGAACT CGGCGTGCTT TTGAGACGAG CGACATCAAA CAAATGCACC AAATTGATCA ATTTCTTAGA AGTTGGTTTG TGGATCACCC GGAGTTTATA TCGAATCCTT TTTATGTTGG TGGAGATTCA TATTCCGGGA AAATTGTTCC AGGAGTTGTG CAACAAACTT CACTTGGAAA TGAGAAAGGC CTCACACCAC TCATAAATCT TCAGGGTTAT GTTCTTGGAA ACCCTGTAAC AGATAAAAAC ATGGAATCTA ACTATAGAAT TTCATTTGCT CATGGGATGG GACTTATTTC AGATGAGCTC TTTGAGTCAC TTGAAAGAAG TTGTGGAGGC AAATTCTTCA ACGTAGACCC AAGTAATAAA AGATGCTCAA ATAATCTTCA ATCTTATGAT CATTGTATGT CAGAGATATA CGCAGAGCAA ATTTTGTTAC GAAACTGCGA AGTAGATTAC GTCTTGGCAG ACACACCAAA CATCAGAACC GATGGAAGAA GAGAACTGAA GGAGTTTTCA GGAAATGATT CATCATCATT GCCACCTCCT AGCTGCTTTA CTTATAAGTA TTTTCTGTCT GCCTTTTGGG CTAACGATGA AAATGTACGC AGAGCTCTAG GCGTGAAGAC GGGAGTAGGA AAATGGAACC GATGCAACAG CCAAAACATA CCATATACAT TTGAGATTAA CAATGCATTT CCGTATCACG TAAACAATAT TAGTAGTTTT TCTTTTTCCT TCTTTGAAAT TGGTGATCAT GATTCTATGG TACCCTTCTC TTCAACTCAA GCATGGATCA GAGCTCTCAA CTATTCCATT GTTGATGACT GGAGAGCTTG GATGATGAGT AGCAATCAAG TTGCTGGATA TACAAGGACT TACGCGAATA AGATGACATT TGCAACCATC AAGGCAATCA TTTCTAAACC CTTTCTTTCT TGTCTTGGAG GAGGACACAC AGCAGAGTAT AATCCAGATC AATGCTCACT TGTGTTCAGA AGATGGATTG ATGGAAAACC TCTCTGAAGA TTCTCACTCA CTTCTCTCTT TTTCTCTCTT TGTTGTTACT AATATCCAGT GAATTGTAAT TTTACCACAT GCTATTATGT TAAATCTTCT ATGACTTTGT GTTGTTG 
Length1597
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3663987.. 3667006
Download Sequence
A.thaliana
AGI-codeAT5G09640.1
Descriptionserine carboxypeptidase-like 19
TAIR curator summaryencodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.
Alias[SCPL19][SNG2][serine carboxypeptidase-like 19][SINAPOYLGLUCOSE ACCUMULATOR 2]
Gene coexpression
MR
MR Locus Description
2 Ahg356968
4.69042 Ahg333050
6.245 Ahg479724
7.54983 Ahg937127 Meprin and TRAF (MATH) homology domain-containing protein
8.06226 Ahg936640
8.48528 Ahg908543 TRAF-like family protein
9.53939 Ahg927901 F-box family protein with a domain of unknown function (DUF295)
15 Ahg906741
16.3707 Ahg952309 Tetratricopeptide repeat (TPR)-like superfamily protein
19.3907 Ahg946796
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression