Detail



ID : Ahg487996

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487996|fgenesh2_kg.6__1130__AT5G11590.1
Sequence
AAAGTTTCTC GCCCATTTCT TCTTAAAGTT CACTGCCCTG TTTTTTTTCC CTCATTTTGA ATAGTTCCCA AACTTTTTAT TTGCATAAAT CTTGGGATCC GAATCGTAAA AAGCAATCAG AATAATAGAC TTGTACGATT CTTGTGCCTA AGCTAAACAA TGGCAGAGGA ATACTACAAC CTCCGCTCGG AGAGAGTAAC TCAGCATCTT GTCCATAACT CGGAGTCAGA CTCAGTGAGT CAGAAAAGCA AAGCAGAGCA AAGCGAGAAT AAGAAGACGA AACGTGTGAG AGACTCCGGT AAACACCCAG TTTACCGTGG AGTAAGAATG AGGAACTGGG GAAAATGGGT GTCGGAGATT CGTGAGCCGA GGAAGAAATC ACGTATTTGG CTCGGAACTT TCCCGACGCC GGAGATGGCG GCGCGTGCAC ACGACGTGGC GGCTCTGAGC ATAAAAGGAA CCTCCGCTAT ACTAAACTTC CCTGAACTTG CTGACTCATT TCCTCGACCC GTCTCGCTAA GCCCTAGAGA CATTCAGACC GCAGCTCTTA AAGCAGCTCA CATGGAACCG ACGACGTCGT TTTCATCTTC CACATCGTCG TCGTCGTCGT CTTCTACGTC TTCGCTTGAG TCTCTTGTGT TGGTGATGGA CCTCTCGAGG ACTGAGTCGG AGGAGCTCGG TGAGATTGTG GAGCTGCCAA GTCTCGGAGC GAGTTACGAC GTCGACTCGG CTAACCTTGG GAACGAGTTT GTGTTCTATG ACTCAGTGGA CTACTGTTTA TATCCGCCGC CGTGGGGACA GTCGTCGGAA GATAACTACG GTTACGGAAT TAGCCCTTAT TTTGGCCATG GCTTGTCGTG GGATCTTTAA CAGTTTATTT TGTATCATTA CTATAATAAT GTTTTGTTAA TCACGTTTTT TTTTTTTTTT AAGTTTAGCT AAGAATTTTT TTTTTTTTTT TTTGCTGCGT GTGTGAGCTC CATAATGATA CGTGTACAAA ACTCTATTTG TGTTTTTTTT TT 
Length1022
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4513471.. 4514574
Download Sequence
A.thaliana
AGI-codeAT5G11590.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.
Alias[TINY2][TINY2]
Gene coexpression
MR
MR Locus Description
14.0712 Ahg903841 IQ-domain 1
17.4356 Ahg492613
46.5081 Ahg487992 ARM repeat superfamily protein
52.4786 Ahg483623 Integrase-type DNA-binding superfamily protein
63.8357 Ahg493451 indole-3-acetic acid inducible 14
67.8233 Ahg945123 Putative membrane lipoprotein
80.7465 Ahg491950 expansin B3
81.5475 Ahg476577 myb domain protein 95
86.8274 Ahg494887 Actin-binding FH2 (formin homology 2) family protein
90.6642 Ahg332832 GRAS family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression