Detail



ID : Ahg488063

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488063|fgenesh2_kg.6__1197__AT5G12210.1
Sequence
CTAAGGAAGA AGAAGGTTTT GATGTTTTAG TGAAAGGTTA GATTTTTTTT TCCCGATCTT CTTCAGGCTC CTCGTATCGT AATCTCTCTT CTGGATCCAA GGTGATGAGC TCTACGTCTT CCTCCCAGAT GGGTCAGCTT GTAGCTGACA AGCATGTACG TTACATTCTG ATGGCAGAAA AGAAGAAAGA GAGTTTTGAG TCTGTGGTGA TGGATCATCT AAGAATGAAT GGTGCTTACT GGGGACTCAC CACTCTCGAC TTACTCGACA AGCTGGGCTG TGTTTCTGAA GATGAAGTCG TTTCATGGCT CATGACTTGC CAGCATGAAT CTGGTGGCTT TGCCGGTAAT ACTGGACACG ATCCACATAT TCTATATACA CTCAGTGCCG TACAAATCTT GGCCCTCTTT GACAAAATTA ACATTCTTGA CATTGGGAAA GTATCAGGTT ATGTTGCTAA GTTGCAGAAC GAAGATGGAT CCTTCTCAGG AGATATGTGG GGAGAAATAG ATACGAGGTT TTCGTACATA GCTATTTGCT GTCTCTCAAT ATTGAAATGT CTTGACAAAA TCAATGTGGA GAAGGCAGTT GAGTACATTG TGAGCTGCAA AAACCTGGAT GGTGGTTTTG GGTGCACACC TGGAGCAGAG TCCCATGCAG GACAGATTTT CTGCTGTGTG GGTGCTCTTG CTATCACTGG GAGTCTCCAT CATGTTGATA AGGACTTACT TGGTTGGTGG TTATGTGAAA GACAAGTAAA GGGTGGGGGC TTAAATGGAC GACCTGAGAA ACTCGCTGAT GTTTGCTATT CTTGGTGGGT CCTATCGAGC CTAATCATGA TAGATAGAGT TCACTGGATC GACAAAGCAA AGCTTGTCAA GTTCATTTTG GACTGTCAGG ATTTGGAAAA CGGAGGCATC TCAGACCGAC CTGACGATGC TGTTGATATC TTCCACACCT ACTTTGGAGT TGCGGGGCTT TCCCTCCTTG AGTATCCTGG AGTCAAAGTA ATTGATCCGG CCTATGCTTT GCCTGTTGAT GTCGTCAACC GGATTATATT CACCAAATGA TTGCAATGGG TATGCTCTTA ATGGTCAAAC TCTATATGCT TTGTTCATTG AACAGTTTAC CTAGGCGGTT TTAGAAGTTT TGTATGCTCA AGGAGGAGAC ATTATAAGAA CACTTTGCAA AACTCAACAG TCTCGCAATG TTGTATTACT TTGCTACATT TTTGAGGTTT CTAATGTAAT GGAAATGAAG TTGTGTCGCT ACACTATATA AATCACA 
Length1287
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4769852.. 4772660
Download Sequence
A.thaliana
AGI-codeAT5G12210.1
DescriptionRAB geranylgeranyl transferase beta subunit 1
TAIR curator summary
Alias[AtRGTB1][RGTB1][RAB geranylgeranyl transferase beta subunit 1]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg495444
9.69536 Ahg492007 NAD(P)-binding Rossmann-fold superfamily protein
26.2679 Ahg483391 Phosphoribosyltransferase family protein
27.0185 Ahg489653 DNA-binding family protein
34.5832 Ahg945111 hexokinase 1
40.8167 Ahg483552 repressor of lrx1
52.3068 Ahg491666 heptahelical transmembrane protein2
54.6809 Ahg477351 glucuronokinase G
66.3325 Ahg936621 methyltransferases
70.2851 Ahg481423 holocarboxylase synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression