Detail


ID : Ahg488177

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488177|fgenesh2_kg.6__1311__AT5G13580.1
Sequence
TGTTAATCAG CCCAACCACA TTGAGAATTT ATCTATAAAT AGAAATAGAA GTTAAATCGT TGGTTAAACA CTTAAACCCC TTTCCTCTTT TCTTCTCCTG CTAACGGTAG TTTTTCTCTC CGTCTATTGA TTTTTCCCGC TTCACAATCG CAACAAACCC AAAGAAGAAT GTCTCGTGTG GTCGCAGCAG ACGACAATAT GGCGTTGCCG CTCTTCTCGC CGGAGTTTGG CAATGTCTCA GGCGCCTCGT CTTCTCCAAC AACGTTCGCA CAGCTCTTGC AAAACGTCGA CGACACGACG CGTCGTAGTC ATGACCAGCA TCACGTTGAT GTCGATCTCG CCTCGCCCGA CCAATCCGTA CCGTTCGTTC TCTCGTTCAC CGATCTCACT TACAGCGTCA AAGTTCGCCG GAAGTTCACA TGGAGGCGCA GCGTTTCTTC AGATCCCGGA GCTCCGTCGG AGGGGATCTT CTCTTCCAAA ACGAAGACGC TCCTCAACGG AATCTCCGGA GAGGCTAGAG ACGGAGAGAT ACTAGCTGTG CTCGGAGCAA GTGGCTCCGG AAAATCGACA CTGATCGATG CATTAGCTAA TCGAATCGCT AAAGGAAGCT TGAAAGGAAA CGTAACTCTA AACGGAGAAG TTCTCAATTC GAAAATGCAG AAAGCCATCT CAGCTTATGT GATGCAAGAC GATCTTCTTT TTCCGATGCT TACAGTTGAA GAAACCTTAA TGTTTGCCGC CGAGTTTCGT CTTCCGCGAA GCCTTTCGAA ATCAAAGAAG AGTCTCCGTG TCCAAGCTTT GATTGATCAA TTAGGACTTA GAAACGCAGC AAATACCGTG ATCGGAGATG AAGGCCACCG TGGAATCTCT GGAGGAGAGA GGCGGCGAGT TTCAATTGGA ATTGATATCA TCCATGATCC GATTCTGCTT TTCCTCGATG AACCAACCTC GGGTTTGGAC TCTACAAGTG CTCTAAGTGT CATTAAGGTT CTTAAACGAA TCGCTCAGAG TGGAAGTATG GTGATCATGA CTCTTCATCA ACCTAGTTAC CGTCTTCTTC GATTGCTTGA TCGTCTTCTC TTCTTGTCCC GTGGCCAAAC TGTCTTCAGC GGATCGCCTG CCATGCTACC TCGCTTCTTT GCTGAGTTTG GCCACCCAAT TCCCGAACAC GAAAACCGCA CCGAGTTCGC TTTGGATTTG ATCCGTGAGC TGGAAGGATC AGCTGGTGGA ACAAGAAGTT TAGTTGAATT CAACAAAGGT TTTAGACAGA GGAAAGCAGA GCCAAGAACT CAGACTGGCC TGTCCTTAAA AGAAGCCATC AGTGCAAGCA TCTCCAAAGG GAAGCTCGTC TCTGGAGCAA CGACAACTAC AACTCCTGGC TCGAGCCCTG TTTCCACCAT TCCTACATTT GCAAACCCCT TTTGGGTCGA ACTCGCGGTT CTAGCCAAAC GGTCCATGAC TAATTCTCGC AGACAGCCTG AACTATTCGG AATACGCCTA GGAGCTGTTT TAGTCACTGG ATTCATCTTA GCCACAATGT TTTGGCAGCT AGATAATTCC CCCAAAGGAG TCCAAGAACG TCTTGGATGC TTCGCCTTTG CAATGTCCAC AACGTTCTAC ACTTGCGCAG ATGCCCTCCC CGTTTTCCTC CAAGAACGTT TCATTTTCAT GAGAGAAACC GCTTACAACG CTTACCGAAG ATCCTCCTAT GTACTCTCTC ACTCACTTGT TGCCCTCCCT TCCTTGATCA TCCTCTCGCT TGCTTTCGCA GCAATCACGT TTTGGGGTGT GGGCTTAGAT GGAGGTCTCA TGGGTTTCCT CTTCTACTTC CTAGTAATCT TAGCCTCTTT CTGGGCTGGA AGCTCATTTG TCACCTTCTT ATCAGGCGTT GTCCCACATG TCATGCTCGG TTACACCATT GTGGTAGCCA TCTTAGCCTA CTTCTTGCTT TTCAGTGGAT TCTTCATCAA CCGAGATCGA ATCCCTGGCT ACTGGATCTG GTTCCATTAC ATATCTTTAG TCAAATACCC TTACGAAGCT GTGCTACTAA ACGAATTCGG TGACCCAACA AAGTGTTTCG TCAGAGGAGT TCAGATATTC GACAACACAC CTCTCGTCGC GGTGCCTCAG GGGATGAAAG TTAAGCTTCT AGCAACTATG AGTAAATCAC TTGGGATGAG GATCACAAGC TCTACTTGCT TGACCACAGG GTATGACATT TTGCAGCAGC AAGGCGTTAC GGATCTCACC AAATGGAATT GCTTGTGGGT CACGGTCGCT TGGGGCTTCT TCTTTCGAAT CTTGTTCTAC TTTTCTCTGC TTTTGGGTAG CAAAAACAAG AGGAGGTAAA AACAAAACTC AGTTTTATCT TATGGAGGAC TGATTTGAAA CTTTGGTTTA CCTTTGTTTG TTTTCTGTAT TTTTCTTTTA TTTCTTTCTT GTATATTCTT ATATGTGGTT GATAAATTGT TGAATTGGAG CTCAACT
Length2487
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5273226.. 5275730
Download Sequence
A.thaliana
AGI-codeAT5G13580.1
DescriptionABC-2 type transporter family protein
TAIR curator summary
Alias[ABCG6][ATP-binding cassette G6]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg935435 glycine-rich protein
3.16228 Ahg479778 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
4 Ahg487769 hydroxyproline-rich glycoprotein family protein
5.19615 Ahg317170 GAST1 protein homolog 5
5.65685 Ahg487764 hydroxyproline-rich glycoprotein family protein
5.65685 Ahg488216 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
6 Ahg484008 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
8.06226 Ahg487770 hydroxyproline-rich glycoprotein family protein
8.3666 Ahg481221 GDSL-like Lipase/Acylhydrolase superfamily protein
8.48528 Ahg476012 Peroxidase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression