Detail



ID : Ahg488404

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488404|fgenesh2_kg.6__1538__AT5G15600.1
Sequence
GATTTTCAAG AATCGGCGGC GGAGTATTCT CGCCGGAAAA ATGGGTAAAG CTAGAGGAGT TAACAGCGGC GGAGGAGAGA GCTCTCTCGG TTATCTTTTT GGTTCCGGCG AGTCTGTTTC CAAACCAAAC AAGGCCACAG CTAACACCAG CTTTACCACG ACCACGACGA CCACAACAAC CACCGACGGA GCTGGAGGTA GACCCAAGAC CACGACCACA ACCACAACCA CCGGAGATAA AAACAAGACA GAGGAGAACT CGGCTGGTGT GAGAGGAAGT CCTAATAATT ACTACAGATC AGATGGACAA AACTGTGGCA ACTTCCTCAC GGAACGACCA TCTACGAAGG TTCATGCTGC ACCAGGTGGA GGATCTTCTC TTGGTTACTT GTTTGGATCT GGTCCATCTG GATCTGACAA ATGATTTCAA TTTCCACGAA TGTAAAAAAA TGTAATCCTT GAAACTGGTT GTGAGGATTG TTTTGGATTT GGCCGTTTCC TGTATTCTTG AAAAAGCTAT GAAGCTTTCT CAATCTTGA 
Length539
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6095899.. 6096566
Download Sequence
A.thaliana
AGI-codeAT5G15600.1
DescriptionSPIRAL1-like4
TAIR curator summarySPIRAL1-LIKE4 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.
Alias[SP1L4][SPIRAL1-like4]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg472691 Galactosyltransferase family protein
20.9762 Ahg889572 Uncharacterised protein family (UPF0497)
23.9374 Ahg479377 plant U-box 29
27.3313 Ahg495618 MBOAT (membrane bound O-acyl transferase) family protein
27.8388 Ahg323669 GATA transcription factor 6
30.9031 Ahg945124 glycine-rich protein
38.5357 Ahg475096 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
39.1535 Ahg911021 Glucose-methanol-choline (GMC) oxidoreductase family protein
44.1814 Ahg942985 Papain family cysteine protease
52.5167 Ahg496195 FASCICLIN-like arabinogalactan-protein 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression