Detail



ID : Ahg488703

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488703|fgenesh2_kg.6__1837__AT5G18300.1
Sequence
ATGTCGATGG TTGAAGAATT TTACGATGAA GAGGAAGAGC TGGTTGGCTT TAGATTTAAT CCTTCAGAAG AAGAACTCAT ACTCGACTAT CTTCTACCTA AGCTTGGCTT CTACCAACCA AAAACGATAT ATTTATTAGA AGACAAGGAC GAGATCTACG CCAAAGTGCC GTGGCGGCTT AAACACACAG AGAATGGTAT TTTTGAACCT AACGAGTGGT TTTACTTCGT GAAAAAGACA AACCGCAAAG TTAAAGGTTG GAAAGCCACT GGAGGGTTGA AAGATGTCTT GTCCAAAAAA AACGGTAAAG TGATTGGGAA GAAGAGAAAT CGCAGTTTCT ACGTTGAAGG TGAACGGAGT GGTTGGACCA TGACAGAGTA TTCTTCCATC GGCAACCAAA ACCAACTTCT CTGCCACCTC AAAGGACCGT GA 
Length432
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7255330.. 7255761
Download Sequence
A.thaliana
AGI-codeAT5G18300.1
DescriptionNAC domain containing protein 88
TAIR curator summary
Alias[anac088][NAC088][NAC domain containing protein 88]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg344912 Plant invertase/pectin methylesterase inhibitor superfamily protein
6 Ahg916172 SGNH hydrolase-type esterase superfamily protein
6.32456 Ahg492035
7.74597 Ahg330465 myb domain protein 100
8.06226 Ahg919877
9.38083 Ahg937625 Protein of unknown function (DUF1278)
10.9087 Ahg322757 cytochrome P450, family 71, subfamily B, polypeptide 16
13.0767 Ahg490539 RING/U-box superfamily protein
13.4164 Ahg915359
13.9642 Ahg313743 PLATZ transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression