Detail



ID : Ahg488733

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488733|fgenesh2_kg.6__1867__AT5G18520.1
Sequence
GTTATTCAAT CCTCCTCCTA CACGTCTCTC TCTCATTCCC TCCGGAGTAA CAATGACGAA AATGCCCCTC TCCGTCGTCT TCATCCTCCT CTTCCTCGCC GTCGTGGTTC CACCTTCTCT GGCGGAGATC AAATCCCTCG TCATCTCGGA CGACGCTCGT CCGATGATCC TCTTCGAGAA ATTCGGATTC ACACACACCG GCCACGTCAC CGTCTCAATC TCCTCCGTCT CCGTCGTCTC CACTTCCGCA GATCCAAATC CAGAAGCATC GCGTCTCGGA TTCTTCCTCC TCTCCGAAGA ATCTCTTCTC CAGGTCCTCC TCGAGATCCA ACAGAACCCT AGATTCTGCG TTCTAGATTC GCACTACGTC ACTCATCTCT TCACATTCAG AGATCTATCT CCTCCGCCAA ACTCCAGATT CAACCAATCT TACCCAGTCA CTTCCCCAAA CGAATACTCT CTCTTCTTCG CGAATTGCGT CCCTGAAACC AAAGTTTCCA TGGCGGTTCG CACAGAGATG TATAACAAAG ATCCAAACGG ATCTAAAGAC TATCTACCAG CTGGATCTAC TCAATTGCCA ACTCTCTACT CCTTCTTCTT CCTCTGCTAC GTTGCTTTCC TCGGTTTCTG GAGCTACACT TGCTGGACCA ACAAACAAAC CGTTCATCGG ATCCATCTTC TCATGGCAGG GCTGCTTCTT ATCAAATCGT TGAATCTGAT TTGTGCAGCT GAAGATAAAC ATTACGTGAA GATCACTGGA ACGCCTCATG GCTGGGATAT TCTCTTCTAC ATCTTCCAAT TCATCCGTGT TGTTCTTCTC TTCACCGTGA TCATCTTGAT CGGAACTGGC TGGTCGTTTT TGAAACCTTT CTTGCAGGAG AAAGAGAAGA ATGTGTTGAT CATTGTGATC CCACTTCAGG TATTAGCCAA CATTGCTTCC ATTGTCATTG GTGAAACTGG ACCTTTTATC AAAGATTGGG TTACTTGGAA CCAAGTGTTT TTGCTTGTGG ATATCATCTG TTGCTGTGCT ATTATCTTCC CCATTGTCTG GTCTATTCGA TCCTTGAGAG AGACCTCGAA AACCGATGGT AAAGCTGCGA GGAACTTGTC GAAGCTCACG TTGTTTAGAC AGTTCTACAT TGTTGTCATC GGATATCTTT ACTTCACGAG AATCGTGGTG TTTGCGCTTA AAACCATTGC GGCTTATAAG TACCAGTGGG TGAGTTTTGC AGCGGAGGAG ATTGTGAGTT TGGTGTTCTA TGTGATCATG TTTCATATGT TTAGGCCTGA GGAGAAGAAT GAGTACTTTG CTGTTGATGA TGATGAAGAA GAAGCTGCTG CTTTGGCTCT TAGGGACGAA GAATTCGAGC TTTGAAAAGC ATACACATGG AGGAATTTTT CTTGGTAAGC AAGGATTTAT TCTTTTTTTT TTTCAGTATG TCTATGTTAA AGTCGTCTAA TACTGCAACT GTTATTGTTC CCTTTTTTGT TAATTTTTGT TCTTCTTTAC ATTTAAATTT TCTCTGTTAT CAACACTTTT TATGGCTTTA AATCGATGTG GATTTTGGGG CTGTAGCAAA TTTTATTTGA AA 
Length1592
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7354884.. 7356478
Download Sequence
A.thaliana
AGI-codeAT5G18520.1
DescriptionLung seven transmembrane receptor family protein
TAIR curator summary
Alias[Cand7][candidate G-protein Coupled Receptor 7]
Gene coexpression
MR
MR Locus Description
4 Ahg923799 Rubredoxin-like superfamily protein
5.38516 Ahg483630 structural constituent of nuclear pore
8.48528 Ahg478354 Reticulon family protein
11.6189 Ahg943606 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
14.0712 Ahg946262 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
18.7083 Ahg495726 Pyruvate kinase family protein
22.4499 Ahg481915 transducin family protein / WD-40 repeat family protein
23.7908 Ahg932420 Nucleic acid-binding, OB-fold-like protein
27.9285 Ahg489030 calmodulin 6
28.4605 Ahg491794 Alkaline-phosphatase-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression