Detail



ID : Ahg488782

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488782|fgenesh2_kg.6__1916__AT5G18980.1
Sequence
AAACTCACGC TTTACTCGTT TTCTCTGCAT CATCAACAAC TCCTCAAGTC ATTACGCACT ATTCAAAAAC AAAAAGTGAA AAGTTTTCGA TTGCGATTTG AGTCGGAAAC GAGTGAACAC AACGAAAGGT TTATAATGGA TTCAAGAAAG TTCGAAGAAG ACGAAGATCG AAGCATTCGT TTGCAGGTCT CTGAGCTTCA AAAATTGGAG GAAGCTAGAG GTTCAAACGA CACCGTTTTC GATCTAAGAA GCAGCATTGA GAAAGTCGAC AGCGGCGAAA CCGCAGACGC AGCTTCTGTT TCCTCCGCGA CCGCGTTTCG TAGAAAATCA ACAGTCCCAG CTCCGGAGAA GAAGCTAACG CTATTCGCTC TCCAACTCGC GATTCTTGAG AAAACCGCCA CCGGAATCGG AACCCTAGGG TTTATCTGGG CCACAGTGGT TCTTCTCGGC GGCTTCGCGA TCACACTCGA CGGTTCCGAT TTCTGGTTTA TCACCATCAT TCTCCTAATC GAAGGTGCTC GAATCTTCAG CAGAAGTCAC GAGCTCGAGT GGCAACACCA AGCCACGTGG ACCGTCGCCG GCGTCGGAAT CAGTAGCTTT CGCGCTCTCC GATCAAGTTC AGCCTCGCTT CTCAAGAATC TAAAACGAAT CAGTGCTTCA ATCTTCAAGC CACGATCGAG GGAAGCGACG GCAAGAGACT GTGTCGTTCC AGAGACGACG TTAGAGACAT GGAAGAACTC AGACGTACCT CTGCTTCCAT ACGCGAGATG GTTCTTTATC TCCAGTACAG TGAGTCGTCT TCTTTACTGG CTCCAACTTC TATCTGCAAC GGCTTGTGTT GCTCTGTCTT CTTACAAGCT TGTCAGGCAT AACTATGGAG ATGTTCATAA AGGAGATACG GATAAGAGGA ATAGACAGTC GGCTCTCAAC ATATTCTACT CGCTCGCCTT TGCGGAGGCG TTGTTGTTTC TTGTGGAGAA AGTTTACTGG GAGTGGCAAG TCAGTGTTTG TAATTTGCTT GAGAATGTGA CTAGAGAGTG TGAGTTTGGG GTTACTGGTT TGGTTTCGAT CAAGAGGTTT TTCTATGATT CGTATTCCAA GTGTGTCAAT GGGAGTATAT TTGATGGTTT GAAGATGGAT ATAGTGAGCT TTGGTATGGA GCTCTTGGAC TCGAACTCTT CTGATGAACA GCTTATTGGA GTGAGGATTC TTAGGCAGTT TGCAGTGACT GAACGCTACT CGGAGGATAC ACTTGAGAAG ATCGGAATTA ACTTTCCTGT TATTGAAAGG TTGGTGGAGA TGTTGAACTG GAAAGATCTC CAAGAGGAAG AGATTAGGAG ATCAGCCGCT GAGATACTAT CGAAACTTGC TGGCAAAAAG CAGAACTCTT TAAGAGTTGC TGGTATTTCT GGTGCAATGG AATCGATTTC ATCGTTGTTA GAGAACACGA GATCATCAGG TGAAGCTCCT GATGAGATTG GAGAGAAAAA GGTGTTCCAT GACCATAATC TACACTACGA TTTCTGGAGA TTCAACAATT TGGGCCTTCT AATTCTGAAG AAATTAGCCA AAGATCATGA CAACTGTGGA AAACTCGGCA ACACGAGAGG TCTTCTCCCG AAGATAATTG ATTTCACACA CGCGGATGAA AATCTGTTGA GGGATGAGAA TGCAGACATC GCGAGGTCAT GTGTTCTGAC ACTGAAACGG TCACTTCAGC TTGTGAAAAT GTTAGCCAGC ACAACAGGGA ACACAGGGAA GTGCCTCCGG AGAGAGATCT CTGAGATTGT ATTCACAGTT AGCAACGTGA GGGATGTACT GAGACACGGG GCGAGATACC CAAAGCTGCA GAAGCTCGGG ATCGGGATAT TGACCAACCT TGCACTTGAG GCCGAAGCTC GGGAGAGAAT TGGCGGAACC GGTGGTGTTC TGAAAGAGTT GTTCAACATT TTCTTTAAAC GGGAAACACA CGGGGACGAG GGGAATGAGG GATGTGTGAG GATTGCTGCA GGAGAAGCGA TAGCGATGCT TGTGTTGGAG AGCAAGAGCA ACTGCCTCCA TGTTCTTAGG CTTGGGGTTA TTGGAAGACT TGTGGAAGCA CTTGAAGTTC CTCCGATCCG TGTGAACGCT GCAAGAGTGT TGAGAAACTT GTGCTTATAC TCCGGGGATG AATGCTTTCA TGACCTGAAG TTCGTTAAAG CAGCAGCACC AACAGTCTTG AAGTCAATAA CTTCAGAAGA CAACAAATTA CAGGAAGTGA TGGTGGGATT AGCAGCCCAA GTGTTTAGAT TCATGAGTTC AAAAGAATCG AGCTATGTTT TCTTGGATTC AGGCATCAAG AGACAAGAAC TGGCAAACTC GTTGGTCTCA ATTCTTAAAA AGAACGACAA GCCGGCGATT AAGGTTCCAA GAATCAGGAG GTTTGTGATT GAGCTGGCGA TTTGGATGAT GGAAGATGAT TTGGAGGATA ATGTAGCATT GTTTAGAGAG ATGGGTCTAG AGAAAGAGCT TGAGAAGGTT CTAGAAACTA CTGCTGAGCT CGAGAACTTT GATGTTTTCT CCGGTACTGT TGGACTAAGC CGTCATAGCA GAACTGTGCA TTCGCTAGCC GAGCTAGCCT TGGAAATTCT TAGAAGATAA ATGAACCATA CACCTCATCC TGCAAAATAT CTTCAAAGCT CTGCATTAGA GCTACAAATA TGACTCAATT GTTTTGTAAG AAGAATGAAT AAACAATGTA CAAATGTGAT GGT 
Length2753
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7571035.. 7574328
Download Sequence
A.thaliana
AGI-codeAT5G18980.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14 Ahg931493 proteinaceous RNase P 2
19.5192 Ahg940820 sulfate transporter 4.1
23.622 Ahg908608 TRICHOME BIREFRINGENCE-LIKE 27
40.8167 Ahg938922 glucan synthase-like 11
41.2553 Ahg926706 Cytochrome P450 superfamily protein
51.8749 Ahg473745
55.2721 Ahg478784 indeterminate(ID)-domain 11
64.1015 Ahg490219 pre-mRNA splicing factor-related
70.993 Ahg493859 Restriction endonuclease, type II-like superfamily protein
71.4423 Ahg470155 L-fucokinase/GDP-L-fucose pyrophosphorylase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression